RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MPHOSPH8Q99549 860 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 RIOK1Q9BRS2 568 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 SRRTQ9BXP5 876 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 CCDC87Q9NVE4 849 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF446Q9NWS9 450 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 AATFQ9NY61 560 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 DACH1Q9UI36 760 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 CEP131Q9UPN4 1083 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 COL4A1P02462 1669 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 DUOX1Q9NRD9 1551 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 SCN7AQ01118 1682 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 A0A0G2JS52 829 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 ERICH2A1L162 156 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 VWA3AA6NCI4 1184 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 GOLGA6L9A6NEM1 432 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 EXOC5O00471 708 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 POLR2DO15514 142 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 ZSCAN12O43309 604 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PRPF3O43395 683 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 STX10O60499 249 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PCP11498 1178 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 BAG6P46379 1132 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PLCD1P51178 756 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 NR5A1Q13285 461 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 NR1I3Q14994 352 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 SPECC1Q5M775 1068 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 C6orf132Q5T0Z8 1188 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 ADGRA1Q86SQ6 560 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 KRT222Q8N1A0 295 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 LRRN4CLQ8ND94 238 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 SPIRE2Q8WWL2 714 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 TNFRSF25Q93038 417 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 SMARCE1Q969G3 411 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 ZKSCAN3Q9BRR0 538 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PHF20Q9BVI0 1012 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 CSRNP2Q9H175 543 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PPP2R2CQ9Y2T4 447 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 NFE2L3Q9Y4A8 694 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 PARP3Q9Y6F1 533 aa5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 V9GYY5 206 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-212ENST00000542495 COL1A1P02452 1464 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 A0A1B0GTH6 734 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 POM121CA8CG34 1229 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 TADA3O75528 432 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 BMP15O95972 392 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 SLFN14P0C7P3 912 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 HOXB3P14651 431 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 CYP7A1P22680 504 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 IGHMBP2P38935 993 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 PBX1P40424 430 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 FAM193AP78312 1265 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 CHRNDQ07001 517 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 CUL4BQ13620 913 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 NPY5RQ15761 445 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 ERCC6LQ2NKX8 1250 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 TUSC1Q2TAM9 212 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 RRP12Q5JTH9 1297 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 SPECC1LQ69YQ0 1117 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 ENAHQ8N8S7 591 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 ESR2Q92731 530 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 CDC5LQ99459 802 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 BAG1Q99933 345 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 UBAC1Q9BSL1 405 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 BRIP1Q9BX63 1249 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 LRP2BPQ9P2M1 347 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 DNAI1Q9UI46 699 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 PCDHGA4Q9Y5G9 962 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 MYH6P13533 1939 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 TNKSO95271 1327 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF831Q5JPB2 1677 aa5.92□□□□□ -1.46
ATPAF1-212ENST00000542495 MYH14Q7Z406 1995 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 A0A087X0B3 334 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 MAGEB6P1A0A0J9YX57 407 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 TRIM75PA6NK02 468 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 EFCAB8A8MWE9 144 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 DDAH1O94760 285 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 ZRANB2O95218 330 aaKnown RBP eCLIP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CALM1P0DP23 149 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CALM2P0DP24 149 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CALM3P0DP25 149 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 KRT2P35908 639 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CRKLP46109 303 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 GOLGA8FQ08AF8 430 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 GOLGA8DPQ0D2H9 430 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 TROAPQ12815 778 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 DPYDQ12882 1025 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 ITPK1Q13572 414 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 SF3B3Q15393 1217 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 FAM98CQ17RN3 349 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 EARS2Q5JPH6 523 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CDKAL1Q5VV42 579 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 SPATA1Q5VX52 437 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 TMED8Q6PL24 325 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 HOMER1Q86YM7 354 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 GRAMD1CQ8IYS0 662 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CMTR1Q8N1G2 835 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 MIGA1Q8NAN2 632 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF384Q8TF68 577 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms