RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 DPF2Q92785 391 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 LZTS2Q9BRK4 669 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 SYT17Q9BSW7 474 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 FOXP1Q9H334 677 aaPredicted RBP12.7□□□□□ -0.38
SCG3-202ENST00000542355 KANSL2Q9H9L4 492 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 TCHHQ07283 1943 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
SCG3-202ENST00000542355 ZNF541Q9H0D2 1346 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 EEF2P13639 858 aaKnown RBP12.7□□□□□ -0.38
SCG3-202ENST00000542355 MMP14P50281 582 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 SEPT2Q15019 361 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 UBA5Q9GZZ9 404 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
SCG3-202ENST00000542355 PSME4Q14997 1843 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 RRP1BQ14684 758 aaKnown RBP12.69□□□□□ -0.38
SCG3-202ENST00000542355 STK38Q15208 465 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 TBC1D10BQ4KMP7 808 aaPredicted RBP12.69□□□□□ -0.38
SCG3-202ENST00000542355 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 ILDR2Q71H61 639 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 MIGA2Q7L4E1 593 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 FAM83AQ86UY5 434 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 LINC00301Q8NCQ3 95 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 BICD2Q8TD16 824 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
SCG3-202ENST00000542355 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 GH2P01242 217 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 LMNB1P20700 586 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 KRT2P35908 639 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 ME1P48163 572 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 NLRP5P59047 1200 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 JAG1P78504 1218 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 SF3A1Q15459 793 aaKnown RBP12.69□□□□□ -0.38
SCG3-202ENST00000542355 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
SCG3-202ENST00000542355 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
SCG3-202ENST00000542355 CABP5Q9NP86 173 aa12.69□□□□□ -0.38
SCG3-202ENST00000542355 SYCE3A1L190 88 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 SNHG28P0DPA3 235 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 LIG1P18858 919 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
SCG3-202ENST00000542355 ICA1Q05084 483 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 RASA3Q14644 834 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 GAS2L3Q86XJ1 694 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 MKL1Q969V6 931 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 SPZ1Q9BXG8 430 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 NYAP2Q9P242 653 aa12.68□□□□□ -0.38
SCG3-202ENST00000542355 COL2A1P02458 1487 aaPredicted RBP12.68□□□□□ -0.38
SCG3-202ENST00000542355 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 YEATS4O95619 227 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 TNNI2P48788 182 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 ASPRV1Q53RT3 343 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 KCNG4Q8TDN1 519 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 BRMS1Q9HCU9 246 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 PCDHA7Q9UN72 937 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 ASTN2O75129 1339 aaPredicted RBP12.67□□□□□ -0.38
SCG3-202ENST00000542355 SPTLC2O15270 562 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 SMARCA1P28370 1054 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 ZNF445P59923 1031 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 ZNF543Q08ER8 600 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 NPY5RQ15761 445 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 CCDC183Q5T5S1 534 aa12.67□□□□□ -0.38
SCG3-202ENST00000542355 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
SCG3-202ENST00000542355 H7C1D1 291 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 ATP2B1P20020 1258 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 TOB1P50616 345 aaPredicted RBP12.66□□□□□ -0.38
SCG3-202ENST00000542355 SLC39A14Q15043 492 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 CCDC96Q2M329 555 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 KIF4BQ2VIQ3 1234 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 EARS2Q5JPH6 523 aaKnown RBP12.66□□□□□ -0.38
SCG3-202ENST00000542355 WWC2Q6AWC2 1192 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 TTBK2Q6IQ55 1244 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 KCTD1Q719H9 257 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 PIGSQ96S52 555 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
SCG3-202ENST00000542355 TBC1D12O60347 775 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 MARCKSP29966 332 aaPredicted RBP12.66□□□□□ -0.38
SCG3-202ENST00000542355 TNFAIP1Q13829 316 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 CCAR1Q8IX12 1150 aaKnown RBP12.66□□□□□ -0.38
SCG3-202ENST00000542355 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
SCG3-202ENST00000542355 HACL1Q9UJ83 578 aa12.66□□□□□ -0.38
SCG3-202ENST00000542355 SIPA1L1O43166 1804 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
SCG3-202ENST00000542355 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms