RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 RNF208Q9H0X6 261 aa15.21■□□□□ 0.03
AP000439.2-201ENST00000542064 NYAP2Q9P242 653 aa15.21■□□□□ 0.03
AP000439.2-201ENST00000542064 F5H6K3 240 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 ERCC3P19447 782 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 SNAP25P60880 206 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 KLRC3Q07444 240 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 COL9A3Q14050 684 aaPredicted RBP15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 COG2Q14746 738 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 ALX1Q15699 326 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 DIS3LQ8TF46 1054 aaKnown RBP15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 NACAP1Q9BZK3 213 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 MTMR7Q9Y216 660 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 RIPK3Q9Y572 518 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 MCM3APO60318 1980 aa15.2■□□□□ 0.02
AP000439.2-201ENST00000542064 COBLO75128 1261 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 PLS1Q14651 629 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 LRRFIP1Q32MZ4 808 aaKnown RBP15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 RRP12Q5JTH9 1297 aaKnown RBP15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 UBE2Q1Q7Z7E8 422 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 NBPF11Q86T75 865 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 ZNF444Q8N0Y2 327 aaPredicted RBP15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 TRPV1Q8NER1 839 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 LPAR1Q92633 364 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 DEFB118Q96PH6 123 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
AP000439.2-201ENST00000542064 VWA5AO00534 786 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 RANBP6O60518 1105 aaKnown RBP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 FGRP09769 529 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 TSPY3P0CV98 308 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 TSPY8P0CW00 308 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 PTPREP23469 700 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 MAPK4P31152 587 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 MNX1P50219 401 aaPredicted RBP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 PTH1RQ03431 593 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 CACNB2Q08289 660 aaPredicted RBP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 GRB14Q14449 540 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 PXYLP1Q8TE99 480 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 U2AF1L4Q8WU68 220 aaKnown RBP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 PAK6Q9NQU5 681 aaPredicted RBP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 ZNF214Q9UL59 606 aaPredicted RBP15.18■□□□□ 0.02
AP000439.2-201ENST00000542064 IGHA2P01877 340 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 HMGCRP04035 888 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 GJA8P48165 433 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 MAP2K5Q13163 448 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 RCSD1Q6JBY9 416 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 MKL1Q969V6 931 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 NUDT12Q9BQG2 462 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 DIAPH3Q9NSV4 1193 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 LRRC37A2A6NM11 1700 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 ZMYM6O95789 1325 aa15.17■□□□□ 0.02
AP000439.2-201ENST00000542064 TSPY2A6NKD2 308 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 ORC4O43929 436 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 TTLL1O95922 423 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 PGK2P07205 417 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 GJB1P08034 283 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 CHMLP26374 656 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 ADORA2AP29274 412 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 CYP2C19P33261 490 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 PDE4BQ07343 736 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 SLFN13Q68D06 897 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 TTBK2Q6IQ55 1244 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 KCTD1Q719H9 257 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 NCAPG2Q86XI2 1143 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 GTF3C2Q8WUA4 911 aaPredicted RBP15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 APBA2Q99767 749 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 SH2D4AQ9H788 454 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 TOMM22Q9NS69 142 aa15.16■□□□□ 0.02
AP000439.2-201ENST00000542064 MCCP23508 829 aa15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 NOVP48745 357 aa15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 PRAMEF19Q5SWL8 479 aa15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 KIFC2Q96AC6 838 aa15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 SLF1Q9BQI6 1058 aa15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 CPVLQ9H3G5 476 aa15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 RAVER2Q9HCJ3 691 aaKnown RBP15.15■□□□□ 0.02
AP000439.2-201ENST00000542064 SLC15A5A6NIM6 579 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 B4E1Z4 1266 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 SGPL1O95470 568 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 ZKSCAN1P17029 563 aaPredicted RBP15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 RGS2P41220 211 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 SLC4A3P48751 1232 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 UBXN2AP68543 259 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 ANO1Q5XXA6 986 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 GMCL1P1Q8NEA9 526 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 FGD4Q96M96 766 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 CRISPLD2Q9H0B8 497 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 HOXC10Q9NYD6 342 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 STX8Q9UNK0 236 aa15.14■□□□□ 0.01
AP000439.2-201ENST00000542064 ZNF536O15090 1300 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms