RNA–Protein interactions for RNA: ENST00000541592.1

HIST4H4-206, Transcript of histone cluster 4 H4, humanhuman

TSL 3

Gene HIST4H4, Length 810 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-206ENST00000541592 PRDM5Q9NQX1 630 aaPredicted RBP23.79■■□□□ 1.4
HIST4H4-206ENST00000541592 ATP8A2Q9NTI2 1148 aa23.79■■□□□ 1.4
HIST4H4-206ENST00000541592 LTBP2Q14767 1821 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 SMARCA5O60264 1052 aaPredicted RBP23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 TAL1P17542 331 aaPredicted RBP23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 ATP5JP18859 108 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 LRRC41Q15345 812 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 SHHQ15465 462 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 C9orf50Q5SZB4 431 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 HAUS7Q99871 368 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 PUS7LQ9H0K6 701 aaKnown RBP23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 MROH8Q9H579 483 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 SLC4A4Q9Y6R1 1079 aa23.78■■□□□ 1.4
HIST4H4-206ENST00000541592 KBTBD13C9JR72 458 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 RAD21O60216 631 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 RAB11FIP3O75154 756 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 HMMRO75330 724 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 CTR9Q6PD62 1173 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 C16orf86Q6ZW13 317 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 BADQ92934 168 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 PRKAG2Q9UGJ0 569 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 CUL9Q8IWT3 2517 aa23.77■■□□□ 1.4
HIST4H4-206ENST00000541592 WDR46O15213 610 aaKnown RBP23.76■■□□□ 1.39
HIST4H4-206ENST00000541592 FCER1AP12319 257 aa23.76■■□□□ 1.39
HIST4H4-206ENST00000541592 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.76■■□□□ 1.39
HIST4H4-206ENST00000541592 ADAMTS5Q9UNA0 930 aa23.76■■□□□ 1.39
HIST4H4-206ENST00000541592 TRIM43BA6NCK2 446 aa23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 FAM83BQ5T0W9 1011 aa23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 ABRAQ8N0Z2 381 aa23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 TRIM43Q96BQ3 446 aaPredicted RBP23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 LENG1Q96BZ8 264 aaPredicted RBP23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 CCDC17Q96LX7 622 aa23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 MMP19Q99542 508 aa23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 DDX19BQ9UMR2 479 aa23.75■■□□□ 1.39
HIST4H4-206ENST00000541592 PGK1P00558 417 aa23.74■■□□□ 1.39
HIST4H4-206ENST00000541592 ITGB8P26012 769 aa23.74■■□□□ 1.39
HIST4H4-206ENST00000541592 NUP88Q99567 741 aaPredicted RBP23.74■■□□□ 1.39
HIST4H4-206ENST00000541592 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.74■■□□□ 1.39
HIST4H4-206ENST00000541592 PDLIM7Q9NR12 457 aa23.74■■□□□ 1.39
HIST4H4-206ENST00000541592 SLC5A4Q9NY91 659 aa23.74■■□□□ 1.39
HIST4H4-206ENST00000541592 MYH7P12883 1935 aa23.74■■□□□ 1.39
HIST4H4-206ENST00000541592 EYSQ5T1H1 3165 aa23.73■■□□□ 1.39
HIST4H4-206ENST00000541592 VWA5AO00534 786 aa23.73■■□□□ 1.39
HIST4H4-206ENST00000541592 SNX17Q15036 470 aa23.73■■□□□ 1.39
HIST4H4-206ENST00000541592 UBE3CQ15386 1083 aa23.73■■□□□ 1.39
HIST4H4-206ENST00000541592 SH2D4AQ9H788 454 aa23.73■■□□□ 1.39
HIST4H4-206ENST00000541592 SLC25A27O95847 323 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 STAT3P40763 770 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 ZNF792Q3KQV3 632 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 C20orf194Q5TEA3 1177 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 RIOX2Q8IUF8 465 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 REPS2Q8NFH8 660 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 KANSL2Q9H9L4 492 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 PPP1R9AQ9ULJ8 1098 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 PLXNA1Q9UIW2 1896 aa23.72■■□□□ 1.39
HIST4H4-206ENST00000541592 MS4A1P11836 297 aa23.71■■□□□ 1.39
HIST4H4-206ENST00000541592 TLE2Q04725 743 aa23.71■■□□□ 1.39
HIST4H4-206ENST00000541592 FAM109BQ6ICB4 259 aaPredicted RBP23.71■■□□□ 1.39
HIST4H4-206ENST00000541592 XPNPEP3Q9NQH7 507 aa23.71■■□□□ 1.39
HIST4H4-206ENST00000541592 ZNF214Q9UL59 606 aaPredicted RBP23.71■■□□□ 1.39
HIST4H4-206ENST00000541592 TSHZ3Q63HK5 1081 aa23.7■■□□□ 1.38
HIST4H4-206ENST00000541592 AMOTL1Q8IY63 956 aa23.7■■□□□ 1.38
HIST4H4-206ENST00000541592 TINF2Q9BSI4 451 aa23.7■■□□□ 1.38
HIST4H4-206ENST00000541592 RIPK3Q9Y572 518 aa23.7■■□□□ 1.38
HIST4H4-206ENST00000541592 CDH23Q9H251 3354 aa23.69■■□□□ 1.38
HIST4H4-206ENST00000541592 ZNF865P0CJ78 1059 aaPredicted RBP23.69■■□□□ 1.38
HIST4H4-206ENST00000541592 SLC4A3P48751 1232 aa23.69■■□□□ 1.38
HIST4H4-206ENST00000541592 KCTD2Q14681 263 aa23.69■■□□□ 1.38
HIST4H4-206ENST00000541592 STRBPQ96SI9 672 aaKnown RBP23.69■■□□□ 1.38
HIST4H4-206ENST00000541592 GOPCQ9HD26 462 aa23.69■■□□□ 1.38
HIST4H4-206ENST00000541592 PHF24Q9UPV7 400 aa23.69■■□□□ 1.38
HIST4H4-206ENST00000541592 GSG1L2A8MUP6 293 aa23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 RARBP10826 455 aa23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 RASA1P20936 1047 aa23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 EPHB4P54760 987 aa23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 IRX5P78411 483 aaPredicted RBP23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 ZNF697Q5TEC3 545 aa23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 DDRGK1Q96HY6 314 aa23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 CDX2Q99626 313 aaPredicted RBP23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 COL25A1Q9BXS0 654 aaPredicted RBP23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 LRRCC1Q9C099 1032 aa23.68■■□□□ 1.38
HIST4H4-206ENST00000541592 MINDY4BA8MYZ0 360 aa23.67■■□□□ 1.38
HIST4H4-206ENST00000541592 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.67■■□□□ 1.38
HIST4H4-206ENST00000541592 OSBP2Q969R2 916 aa23.67■■□□□ 1.38
HIST4H4-206ENST00000541592 SEMA6BQ9H3T3 888 aa23.67■■□□□ 1.38
HIST4H4-206ENST00000541592 C1orf53Q5VUE5 145 aa23.66■■□□□ 1.38
HIST4H4-206ENST00000541592 TTYH1Q9H313 450 aaPredicted RBP23.66■■□□□ 1.38
HIST4H4-206ENST00000541592 GREB1LQ9C091 1923 aaPredicted RBP23.66■■□□□ 1.38
HIST4H4-206ENST00000541592 VCANP13611 3396 aa23.66■■□□□ 1.38
HIST4H4-206ENST00000541592 PRUNE2Q8WUY3 3088 aa23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 A0A1W2PQ45 241 aaPredicted RBP23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 A0A1W2PQY0 241 aa23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 F5H6K3 240 aa23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 PQBP1O60828 265 aaKnown RBP23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 SNAI1O95863 264 aaPredicted RBP23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 NDUFB10O96000 172 aa23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 KLRC3Q07444 240 aa23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 ZSCAN25Q6NSZ9 544 aa23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 CPXCR1Q8N123 301 aa23.65■■□□□ 1.38
HIST4H4-206ENST00000541592 SLF1Q9BQI6 1058 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms