RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
COPA-205ENST00000541366 GABPAQ06546 454 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 CCDC85BQ15834 202 aaPredicted RBP14.37□□□□□ -0.11
COPA-205ENST00000541366 C16orf59Q7L2K0 433 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 SLC44A5Q8NCS7 719 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 MROH8Q9H579 483 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 SLC5A4Q9NY91 659 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 PLXNA1Q9UIW2 1896 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
COPA-205ENST00000541366 CYP2D6P10635 497 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 FCER1AP12319 257 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 TMEM132BQ14DG7 1078 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 RNF180Q86T96 592 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 SIAH1Q8IUQ4 282 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 ABRAQ8N0Z2 381 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 ARHGAP45Q92619 1136 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 EAF2Q96CJ1 260 aaPredicted RBP14.36□□□□□ -0.11
COPA-205ENST00000541366 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
COPA-205ENST00000541366 PBX4Q9BYU1 374 aa14.36□□□□□ -0.11
COPA-205ENST00000541366 COL11A1P12107 1806 aaPredicted RBP14.36□□□□□ -0.11
COPA-205ENST00000541366 SMIM22K7EJ46 135 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 ADAMTS4O75173 837 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 ZNF865P0CJ78 1059 aaPredicted RBP14.35□□□□□ -0.11
COPA-205ENST00000541366 ADGRE1Q14246 886 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 MB21D1Q8N884 522 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 ADAMTS19Q8TE59 1207 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 DYNLL2Q96FJ2 89 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 ASB2Q96Q27 587 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 C1orf115Q9H7X2 142 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 FBXO28Q9NVF7 368 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 NAV1Q8NEY1 1877 aa14.35□□□□□ -0.11
COPA-205ENST00000541366 PARP14Q460N5 1801 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 MYADML2A6NDP7 307 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 TIMP1P01033 207 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 ACRP10323 421 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 ACLYP53396 1101 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 ZNF792Q3KQV3 632 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 TMEM240Q5SV17 173 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 CCDC129Q6ZRS4 1044 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 ANKRD33Q7Z3H0 272 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 SSH3Q8TE77 659 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 FRAT1Q92837 279 aaPredicted RBP14.34□□□□□ -0.11
COPA-205ENST00000541366 NECAB3Q96P71 396 aaPredicted RBP14.34□□□□□ -0.11
COPA-205ENST00000541366 GAS2L1Q99501 681 aaPredicted RBP14.34□□□□□ -0.11
COPA-205ENST00000541366 MMP19Q99542 508 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 STARD7Q9NQZ5 370 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 THEGQ9P2T0 379 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 TBX21Q9UL17 535 aa14.34□□□□□ -0.11
COPA-205ENST00000541366 TCF20Q9UGU0 1960 aaKnown RBP14.34□□□□□ -0.11
COPA-205ENST00000541366 DCDC2CA8MYV0 355 aa14.33□□□□□ -0.12
COPA-205ENST00000541366 AKR1B1P15121 316 aa14.33□□□□□ -0.12
COPA-205ENST00000541366 ATP8B2P98198 1209 aa14.33□□□□□ -0.12
COPA-205ENST00000541366 SDR42E1Q8WUS8 393 aa14.33□□□□□ -0.12
COPA-205ENST00000541366 ATXN2LQ8WWM7 1075 aaKnown RBP14.33□□□□□ -0.12
COPA-205ENST00000541366 TOX2Q96NM4 488 aa14.33□□□□□ -0.12
COPA-205ENST00000541366 UHRF1Q96T88 793 aaPredicted RBP14.33□□□□□ -0.12
COPA-205ENST00000541366 NRBP1Q9UHY1 535 aa14.33□□□□□ -0.12
COPA-205ENST00000541366 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
COPA-205ENST00000541366 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 IGSF3O75054 1194 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 CSF2RAP15509 400 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 IGFBP4P22692 258 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 PLA2G5P39877 138 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 MAP3K12Q12852 859 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 KCNA10Q16322 511 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 MFSD5Q6N075 450 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 CERS3Q8IU89 383 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
COPA-205ENST00000541366 SLC25A27O95847 323 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 AKR1A1P14550 325 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 MRPS5P82675 430 aaKnown RBP14.31□□□□□ -0.12
COPA-205ENST00000541366 ICA1Q05084 483 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 AKNAD1Q5T1N1 836 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 CCSAPQ6IQ19 270 aaPredicted RBP14.31□□□□□ -0.12
COPA-205ENST00000541366 TMEM179Q6ZVK1 233 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 ZNF365Q70YC5 407 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 RIOX2Q8IUF8 465 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 KLHDC9Q8NEP7 349 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 PPP1R12CQ9BZL4 782 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
COPA-205ENST00000541366 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
COPA-205ENST00000541366 CYP2D7A0A087X1C5 515 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 ADCY6O43306 1168 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 SNAI1O95863 264 aaPredicted RBP14.3□□□□□ -0.12
COPA-205ENST00000541366 KCTD2Q14681 263 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 LCORLQ8N3X6 602 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 FAM122AQ96E09 287 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
COPA-205ENST00000541366 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
COPA-205ENST00000541366 NKX2-4Q9H2Z4 354 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 ARHGEF10LQ9HCE6 1279 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 CXXC1Q9P0U4 656 aaPredicted RBP14.3□□□□□ -0.12
COPA-205ENST00000541366 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
COPA-205ENST00000541366 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
COPA-205ENST00000541366 ROBO3Q96MS0 1386 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms