RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CCDC144CPQ8IYA2 1237 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 C7orf61Q8IZ16 206 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 USHBP1Q8N6Y0 703 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 C19orf47Q8N9M1 422 aaKnown RBP9.85□□□□□ -0.83
YBX3-210ENST00000540975 TINF2Q9BSI4 451 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 ADAMTS10Q9H324 1103 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 SLAMF8Q9P0V8 285 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 CTNND2Q9UQB3 1225 aa9.85□□□□□ -0.83
YBX3-210ENST00000540975 DNAJC25-GNG10A0A024R161 153 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 BIN1O00499 593 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 SIGLEC6O43699 453 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 PRAMEF1O95521 474 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 TP53P04637 393 aaPredicted RBP9.84□□□□□ -0.83
YBX3-210ENST00000540975 JUNBP17275 347 aaPredicted RBP9.84□□□□□ -0.83
YBX3-210ENST00000540975 LTKP29376 864 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 ZNF655Q8N720 491 aaPredicted RBP9.84□□□□□ -0.83
YBX3-210ENST00000540975 FAM169BQ8N8A8 192 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 TCTN2Q96GX1 697 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 C19orf73Q9NVV2 129 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 PCDHB12Q9Y5F1 795 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 SLC12A7Q9Y666 1083 aa9.84□□□□□ -0.83
YBX3-210ENST00000540975 GDNFP39905 211 aa9.83□□□□□ -0.84
YBX3-210ENST00000540975 CASP7P55210 303 aa9.83□□□□□ -0.84
YBX3-210ENST00000540975 PPP2R5EQ16537 467 aa9.83□□□□□ -0.84
YBX3-210ENST00000540975 AXDND1Q5T1B0 1012 aaPredicted RBP9.83□□□□□ -0.84
YBX3-210ENST00000540975 TDRD10Q5VZ19 366 aaKnown RBP9.83□□□□□ -0.84
YBX3-210ENST00000540975 FLAD1Q8NFF5 587 aa9.83□□□□□ -0.84
YBX3-210ENST00000540975 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
YBX3-210ENST00000540975 ANAPC16Q96DE5 110 aa9.83□□□□□ -0.84
YBX3-210ENST00000540975 CCDC120Q96HB5 630 aa9.83□□□□□ -0.84
YBX3-210ENST00000540975 MINPP1Q9UNW1 487 aa9.83□□□□□ -0.84
YBX3-210ENST00000540975 SHOXO15266 292 aa9.82□□□□□ -0.84
YBX3-210ENST00000540975 PAPLNO95428 1278 aa9.82□□□□□ -0.84
YBX3-210ENST00000540975 BBS9Q3SYG4 887 aa9.82□□□□□ -0.84
YBX3-210ENST00000540975 SLC43A3Q8NBI5 491 aa9.82□□□□□ -0.84
YBX3-210ENST00000540975 CHST7Q9NS84 486 aa9.82□□□□□ -0.84
YBX3-210ENST00000540975 GFOD1Q9NXC2 390 aa9.82□□□□□ -0.84
YBX3-210ENST00000540975 TEKQ02763 1124 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 ARID5AQ03989 594 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 GNPTABQ3T906 1256 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 DCAF15Q66K64 600 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 PHAXQ9H814 394 aaKnown RBP9.81□□□□□ -0.84
YBX3-210ENST00000540975 FAM86C1Q9NVL1 165 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 PRR13Q9NZ81 148 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 TMEM59LQ9UK28 342 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 MRVI1Q9Y6F6 885 aa9.81□□□□□ -0.84
YBX3-210ENST00000540975 AFMP43652 599 aa9.8□□□□□ -0.84
YBX3-210ENST00000540975 RNF111Q6ZNA4 994 aa9.8□□□□□ -0.84
YBX3-210ENST00000540975 LINC00116Q8NCU8 138 aa9.8□□□□□ -0.84
YBX3-210ENST00000540975 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.8□□□□□ -0.84
YBX3-210ENST00000540975 PCDHB10Q9UN67 800 aa9.8□□□□□ -0.84
YBX3-210ENST00000540975 ZNF281Q9Y2X9 895 aa9.8□□□□□ -0.84
YBX3-210ENST00000540975 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
YBX3-210ENST00000540975 CD247P20963 164 aa9.79□□□□□ -0.84
YBX3-210ENST00000540975 ASIC4Q96FT7 647 aa9.79□□□□□ -0.84
YBX3-210ENST00000540975 FOXP3Q9BZS1 431 aa9.79□□□□□ -0.84
YBX3-210ENST00000540975 MEIS1O00470 390 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 ZGLP1P0C6A0 271 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 HK2P52789 917 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 PCBP3P57721 371 aaKnown RBP9.78□□□□□ -0.84
YBX3-210ENST00000540975 FYB2Q5VWT5 728 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 GMLQ99445 158 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 GP6Q9HCN6 339 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 TCFL5Q9UL49 500 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 ZNF451Q9Y4E5 1061 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 CARMIL2Q6F5E8 1435 aa9.78□□□□□ -0.84
YBX3-210ENST00000540975 SSU72P8A0A1W2PR75 194 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 SYPP08247 313 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 FGRP09769 529 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 DNAJA1P31689 397 aaKnown RBP9.77□□□□□ -0.85
YBX3-210ENST00000540975 ETFBP38117 255 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 CTSKP43235 329 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 ZNF445P59923 1031 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 ERVFC1P60507 584 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 SLC7A5Q01650 507 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 NOL9Q5SY16 702 aaKnown RBP9.77□□□□□ -0.85
YBX3-210ENST00000540975 MCF2L2Q86YR7 1114 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 DHX38Q92620 1227 aaKnown RBP9.77□□□□□ -0.85
YBX3-210ENST00000540975 SYTL4Q96C24 671 aaPredicted RBP9.77□□□□□ -0.85
YBX3-210ENST00000540975 EBF1Q9UH73 591 aa9.77□□□□□ -0.85
YBX3-210ENST00000540975 SMAD7O15105 426 aaKnown RBP9.76□□□□□ -0.85
YBX3-210ENST00000540975 PAX4O43316 350 aa9.76□□□□□ -0.85
YBX3-210ENST00000540975 RPL10P27635 214 aaKnown RBP9.76□□□□□ -0.85
YBX3-210ENST00000540975 TCEAL1Q15170 157 aa9.76□□□□□ -0.85
YBX3-210ENST00000540975 KLHL6Q8WZ60 621 aa9.76□□□□□ -0.85
YBX3-210ENST00000540975 BRF1Q92994 677 aa9.76□□□□□ -0.85
YBX3-210ENST00000540975 CBFA2T2O43439 604 aa9.75□□□□□ -0.85
YBX3-210ENST00000540975 LINC01599Q8WXQ3 324 aa9.75□□□□□ -0.85
YBX3-210ENST00000540975 FAM168AQ92567 244 aa9.75□□□□□ -0.85
YBX3-210ENST00000540975 DSCC1Q9BVC3 393 aa9.75□□□□□ -0.85
YBX3-210ENST00000540975 A0A087WZG4 1122 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 TMEM82A0PJX8 343 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 HPXP02790 462 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 BMP8BP34820 402 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 HEATR6Q6AI08 1181 aaKnown RBP9.74□□□□□ -0.85
YBX3-210ENST00000540975 PDZD8Q8NEN9 1154 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 KIRREL1Q96J84 757 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 HAUS7Q99871 368 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 SP110Q9HB58 689 aa9.74□□□□□ -0.85
YBX3-210ENST00000540975 PRKAG3Q9UGI9 489 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms