RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 TCEANC2Q96MN5 208 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 ATP13A2Q9NQ11 1180 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 ZNF70Q9UC06 446 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 MKRN1Q9UHC7 482 aaKnown RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 ANAPC4Q9UJX5 808 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 NAP1L2Q9ULW6 460 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 MYO5AQ9Y4I1 1855 aaKnown RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 MYH7P12883 1935 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 ERICH2A1L162 156 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 WNT10BO00744 389 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 IFIT3O14879 490 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 PRDM1O75626 825 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 ZMYND10O75800 440 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 WFS1O76024 890 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 CCNYL3P0C7X3 344 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 GJA5P36382 358 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 TNNI2P48788 182 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 AK2P54819 239 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 NFIAQ12857 509 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 SART3Q15020 963 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 AMHR2Q16671 573 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 Q6ZUG5 572 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 CRACR2BQ8N4Y2 399 aaPredicted RBP7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 SPIRE2Q8WWL2 714 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 SYMPKQ92797 1274 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 DYNLL2Q96FJ2 89 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 UBAC1Q9BSL1 405 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 IDI2Q9BXS1 227 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 LRRC2Q9BYS8 371 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 OSBPL5Q9H0X9 879 aaPredicted RBP7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 DHX36Q9H2U1 1008 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 DDX4Q9NQI0 724 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 LIMCH1Q9UPQ0 1083 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 MAST2Q6P0Q8 1798 aa7.81□□□□□ -1.16
CLTCL1-206ENST00000540896 NEDD4P46934 1319 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 TSPY2A6NKD2 308 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 SMIM22K7EJ46 135 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ENTPD3O75355 529 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ALDH1A1P00352 501 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 CDK8P49336 464 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 PLCD1P51178 756 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 SKOR1P84550 965 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 EXOSC10Q01780 885 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 TNFAIP1Q13829 316 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 PTPRNQ16849 979 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 TMEM67Q5HYA8 995 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 DESI1Q6ICB0 168 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 NFXL1Q6ZNB6 911 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 LDHDQ86WU2 507 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 IQCA1Q86XH1 822 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ZFPM1Q8IX07 1006 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 MB21D2Q8IYB1 491 aaPredicted RBP7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ZC3H15Q8WU90 426 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 BRF1Q92994 677 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ZBED3Q96IU2 234 aaPredicted RBP7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ZSCAN31Q96LW9 406 aaPredicted RBP7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 TTC14Q96N46 770 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ALDH8A1Q9H2A2 487 aaPredicted RBP7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ZSWIM5Q9P217 1185 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 PI4KBQ9UBF8 816 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 SWAP70Q9UH65 585 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 PGAP2Q9UHJ9 254 aa7.8□□□□□ -1.16
CLTCL1-206ENST00000540896 ASTN2O75129 1339 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 CEP350Q5VT06 3117 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 CCDC69A6NI79 296 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 MPHOSPH10O00566 681 aaKnown RBP7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 ORC4O43929 436 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 TOMM70O94826 608 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 TSPY3P0CV98 308 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 TSPY8P0CW00 308 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 TFAP4Q01664 338 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 FAM47AQ5JRC9 791 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 ANGEL2Q5VTE6 544 aaKnown RBP7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 FKBP1CQ5VVH2 108 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 MAP1SQ66K74 1059 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 SYNE3Q6ZMZ3 975 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 C16orf86Q6ZW13 317 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 CYB5R4Q7L1T6 521 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 FOXP4Q8IVH2 680 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 FAM151AQ8WW52 585 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 HPS1Q92902 700 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 DCPSQ96C86 337 aaKnown RBP7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 TMX3Q96JJ7 454 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 TMEM87BQ96K49 555 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 TRIM47Q96LD4 638 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 CSRNP1Q96S65 589 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 ZKSCAN3Q9BRR0 538 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 SH2B1Q9NRF2 756 aaPredicted RBP7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 EVA1BQ9NVM1 165 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 SERPINB13Q9UIV8 391 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 PCDHGC3Q9UN70 934 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 MYH2Q9UKX2 1941 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 ADAMTSL1Q8N6G6 1762 aa7.79□□□□□ -1.16
CLTCL1-206ENST00000540896 WDR19Q8NEZ3 1342 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 DDTLA6NHG4 134 aaPredicted RBP7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 FGRP09769 529 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 NT5C2P49902 561 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 ANTXR2P58335 489 aa7.78□□□□□ -1.16
CLTCL1-206ENST00000540896 APOBRQ0VD83 1088 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms