RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 ATP2B1P20020 1258 aa15.74■□□□□ 0.11
RTN3-210ENST00000540798 ALDH1B1P30837 517 aa15.74■□□□□ 0.11
RTN3-210ENST00000540798 PDE6BP35913 854 aa15.74■□□□□ 0.11
RTN3-210ENST00000540798 TPM4P67936 248 aa15.74■□□□□ 0.11
RTN3-210ENST00000540798 MYL5Q02045 173 aa15.74■□□□□ 0.11
RTN3-210ENST00000540798 MORC3Q14149 939 aa15.74■□□□□ 0.11
RTN3-210ENST00000540798 SPZ1Q9BXG8 430 aa15.74■□□□□ 0.11
RTN3-210ENST00000540798 GABPAQ06546 454 aa15.73■□□□□ 0.11
RTN3-210ENST00000540798 GALNT17Q6IS24 598 aa15.73■□□□□ 0.11
RTN3-210ENST00000540798 TYW1BQ6NUM6 668 aa15.73■□□□□ 0.11
RTN3-210ENST00000540798 BLIDQ8IZY5 108 aa15.73■□□□□ 0.11
RTN3-210ENST00000540798 SMARCA1P28370 1054 aa15.73■□□□□ 0.11
RTN3-210ENST00000540798 ISM2Q6H9L7 571 aa15.73■□□□□ 0.11
RTN3-210ENST00000540798 C4orf32Q8N8J7 132 aa15.73■□□□□ 0.11
RTN3-210ENST00000540798 ZNF174Q15697 407 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 PIK3AP1Q6ZUJ8 805 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 XPO4Q9C0E2 1151 aaKnown RBP15.72■□□□□ 0.11
RTN3-210ENST00000540798 BARHL2Q9NY43 387 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 PTGDRQ13258 359 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 ZNF772Q68DY9 489 aaPredicted RBP15.72■□□□□ 0.11
RTN3-210ENST00000540798 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 SYMPKQ92797 1274 aaKnown RBP15.72■□□□□ 0.11
RTN3-210ENST00000540798 MASTLQ96GX5 879 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 EPSTI1Q96J88 318 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 STXBP3O00186 592 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 SLFN14P0C7P3 912 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 OLFM4Q6UX06 510 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 PDCL3Q9H2J4 239 aa15.72■□□□□ 0.11
RTN3-210ENST00000540798 SIPA1L1O43166 1804 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 RIMBP2O15034 1052 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 APBA3O96018 575 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 IL17AQ16552 155 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 ARL6IP4Q66PJ3 421 aaKnown RBP15.71■□□□□ 0.11
RTN3-210ENST00000540798 MLKLQ8NB16 471 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 GPKOWQ92917 476 aaPredicted RBP eCLIP15.71■□□□□ 0.113e-6■□□□□ 9.4
RTN3-210ENST00000540798 IFNKQ9P0W0 207 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 IGKV6D-41A0A0C4DH26 115 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 TOP1P11387 765 aaKnown RBP15.71■□□□□ 0.11
RTN3-210ENST00000540798 GSDMDP57764 484 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 CCZ1BP86790 482 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 CCZ1P86791 482 aaPredicted RBP15.71■□□□□ 0.11
RTN3-210ENST00000540798 SMARCE1Q969G3 411 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 ZC3H12CQ9C0D7 883 aaKnown RBP15.71■□□□□ 0.11
RTN3-210ENST00000540798 KCND1Q9NSA2 647 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 STX8Q9UNK0 236 aa15.71■□□□□ 0.11
RTN3-210ENST00000540798 MMP10P09238 476 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 FANCCQ00597 558 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 E2F4Q16254 413 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 CT47A1Q5JQC4 288 aaPredicted RBP15.7■□□□□ 0.1
RTN3-210ENST00000540798 CCDC148Q8NFR7 591 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 CEP95Q96GE4 821 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 PRIMPOLQ96LW4 560 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 PCDHA6Q9UN73 950 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 PCDHA8Q9Y5H6 950 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 ARID5BQ14865 1188 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 DPP8Q6V1X1 898 aaPredicted RBP15.7■□□□□ 0.1
RTN3-210ENST00000540798 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 HHIPL2Q6UWX4 724 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 GRAMD1CQ8IYS0 662 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 PAGE5Q96GU1 130 aa15.7■□□□□ 0.1
RTN3-210ENST00000540798 DDX4Q9NQI0 724 aaKnown RBP15.7■□□□□ 0.1
RTN3-210ENST00000540798 KLRF2D3W0D1 207 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 ATP1A3P13637 1013 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 PDILTQ8N807 584 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 SLX4Q8IY92 1834 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 SCN9AQ15858 1988 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
RTN3-210ENST00000540798 DPYDQ12882 1025 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 ENOX1Q8TC92 643 aaKnown RBP15.69■□□□□ 0.1
RTN3-210ENST00000540798 DHX58Q96C10 678 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 ZMYND12Q9H0C1 365 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 DACH1Q9UI36 760 aa15.69■□□□□ 0.1
RTN3-210ENST00000540798 PARP1P09874 1014 aaKnown RBP15.68■□□□□ 0.1
RTN3-210ENST00000540798 ZNF18P17022 549 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 VWA3AA6NCI4 1184 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 SMC2O95347 1197 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 SNHG28P0DPA3 235 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 FKBP1AP62942 108 aaKnown RBP15.68■□□□□ 0.1
RTN3-210ENST00000540798 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
RTN3-210ENST00000540798 RASGRP2Q7LDG7 609 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 MED15Q96RN5 788 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 PYM1Q9BRP8 204 aaKnown RBP15.68■□□□□ 0.1
RTN3-210ENST00000540798 TTF2Q9UNY4 1162 aaKnown RBP15.68■□□□□ 0.1
RTN3-210ENST00000540798 LONP1P36776 959 aaKnown RBP15.68■□□□□ 0.1
RTN3-210ENST00000540798 FMR1Q06787 632 aaKnown RBP eCLIP15.68■□□□□ 0.1
RTN3-210ENST00000540798 CCDC34Q96HJ3 373 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 MRIQ9BWK5 157 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 MTMR4Q9NYA4 1195 aa15.68■□□□□ 0.1
RTN3-210ENST00000540798 GOLGA8HP0CJ92 632 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 ERCC5P28715 1186 aaPredicted RBP15.67■□□□□ 0.1
RTN3-210ENST00000540798 MCM7P33993 719 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 STYK1Q6J9G0 422 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 PDXDC2PQ6P474 469 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 FILIP1Q7Z7B0 1213 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 MYRIPQ8NFW9 859 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 RIOX1Q9H6W3 641 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 FANCLQ9NW38 375 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 SWAP70Q9UH65 585 aa15.67■□□□□ 0.1
RTN3-210ENST00000540798 CBFA2T2O43439 604 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms