RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
COLCA1-204ENST00000540738 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
COLCA1-204ENST00000540738 WRNIP1Q96S55 665 aa15.87■□□□□ 0.13
COLCA1-204ENST00000540738 CNTNAP4Q9C0A0 1308 aa15.87■□□□□ 0.13
COLCA1-204ENST00000540738 GCNT3O95395 438 aa15.87■□□□□ 0.13
COLCA1-204ENST00000540738 ATF7P17544 494 aaPredicted RBP15.87■□□□□ 0.13
COLCA1-204ENST00000540738 CCND2P30279 289 aa15.87■□□□□ 0.13
COLCA1-204ENST00000540738 GTF3C6Q969F1 213 aa15.87■□□□□ 0.13
COLCA1-204ENST00000540738 GPR101Q96P66 508 aaPredicted RBP15.87■□□□□ 0.13
COLCA1-204ENST00000540738 IGSF3O75054 1194 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 ARID5AQ03989 594 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 RAPGEF1Q13905 1077 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 SMC1AQ14683 1233 aaKnown RBP15.86■□□□□ 0.13
COLCA1-204ENST00000540738 ABI1Q8IZP0 508 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 JADE2Q9NQC1 790 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 DDX25Q9UHL0 483 aaKnown RBP15.86■□□□□ 0.13
COLCA1-204ENST00000540738 USP17L5A8MUK1 530 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 SASH1O94885 1247 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 TAF3Q5VWG9 929 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 RNF34Q969K3 372 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 HACL1Q9UJ83 578 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 ZNF215Q9UL58 517 aaPredicted RBP15.86■□□□□ 0.13
COLCA1-204ENST00000540738 TACC1O75410 805 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 PPP2R5AQ15172 486 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 GOLGA5Q8TBA6 731 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 A0A1B0GVL5 298 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 FAM102BQ5T8I3 360 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 LCORLQ8N3X6 602 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 LARSQ9P2J5 1176 aaKnown RBP15.86■□□□□ 0.13
COLCA1-204ENST00000540738 MADDQ8WXG6 1647 aa15.86■□□□□ 0.13
COLCA1-204ENST00000540738 KDM4FA0A1W2PPD8 638 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 ADCY5O95622 1261 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 POLGP54098 1239 aaPredicted RBP15.85■□□□□ 0.13
COLCA1-204ENST00000540738 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 CHRNA5P30532 468 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 NOC4LQ9BVI4 516 aaKnown RBP15.85■□□□□ 0.13
COLCA1-204ENST00000540738 DNAJC25Q9H1X3 360 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 SUGCTQ9HAC7 445 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 ADCY9O60503 1353 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 XPOTO43592 962 aaKnown RBP15.85■□□□□ 0.13
COLCA1-204ENST00000540738 OR52Z1P0C646 297 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 HSP90AA4PQ58FG1 418 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 STYK1Q6J9G0 422 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 LUC7L2Q9Y383 392 aaKnown RBP15.85■□□□□ 0.13
COLCA1-204ENST00000540738 IKBKGQ9Y6K9 419 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 COPB2P35606 906 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 FAM193AP78312 1265 aa15.85■□□□□ 0.13
COLCA1-204ENST00000540738 TRMT2AQ8IZ69 625 aaKnown RBP15.85■□□□□ 0.13
COLCA1-204ENST00000540738 TDRD3Q9H7E2 651 aaKnown RBP15.85■□□□□ 0.13
COLCA1-204ENST00000540738 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
COLCA1-204ENST00000540738 KRT19P08727 400 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 SLC17A8Q8NDX2 589 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 WDR11Q9BZH6 1224 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 TLR7Q9NYK1 1049 aaKnown RBP15.84■□□□□ 0.13
COLCA1-204ENST00000540738 CPS1P31327 1500 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 POLR2DO15514 142 aaKnown RBP15.84■□□□□ 0.13
COLCA1-204ENST00000540738 PFKFB2O60825 505 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 GCFC2P16383 781 aaKnown RBP15.84■□□□□ 0.13
COLCA1-204ENST00000540738 GPSM2P81274 684 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 MYL5Q02045 173 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 HLTFQ14527 1009 aaKnown RBP eCLIP15.84■□□□□ 0.13
COLCA1-204ENST00000540738 LIN9Q5TKA1 542 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 TTC14Q96N46 770 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 FSD2A1L4K1 749 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 IGKV5-2P06315 115 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 KIF5AQ12840 1032 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 MIS18BP1Q6P0N0 1132 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 NOSTRINQ8IVI9 506 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 ZSCAN23Q3MJ62 389 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 PRR5LQ6MZQ0 368 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 CDK8P49336 464 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 LIG4P49917 911 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 TYRO3Q06418 890 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
COLCA1-204ENST00000540738 KCTD1Q719H9 257 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 CSGALNACT2Q8N6G5 542 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 RNF26Q9BY78 433 aaPredicted RBP15.84■□□□□ 0.13
COLCA1-204ENST00000540738 RASAL2Q9UJF2 1139 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 ZHX2Q9Y6X8 837 aa15.84■□□□□ 0.13
COLCA1-204ENST00000540738 IQSEC2Q5JU85 1478 aa15.83■□□□□ 0.13
COLCA1-204ENST00000540738 INF2Q27J81 1249 aa15.83■□□□□ 0.13
COLCA1-204ENST00000540738 OSBPL3Q9H4L5 887 aa15.83■□□□□ 0.13
COLCA1-204ENST00000540738 LRFN2Q9ULH4 789 aa15.83■□□□□ 0.13
COLCA1-204ENST00000540738 KIDINS220Q9ULH0 1771 aa15.83■□□□□ 0.13
COLCA1-204ENST00000540738 CKAP4Q07065 602 aaKnown RBP15.83■□□□□ 0.12
COLCA1-204ENST00000540738 FASTKD5Q7L8L6 764 aaKnown RBP15.83■□□□□ 0.12
COLCA1-204ENST00000540738 ZSCAN30Q86W11 494 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 NEXMIFQ5QGS0 1516 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 KRT86O43790 486 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 GJC1P36383 396 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 PTH1RQ03431 593 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 ODR4Q5SWX8 454 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 EP400NLQ6ZTU2 488 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 DYMQ7RTS9 669 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 DYDC1Q8WWB3 177 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 RPS6KC1Q96S38 1066 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 HAUS2Q9NVX0 235 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms