RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 HDXQ7Z353 690 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 ACRBPQ8NEB7 543 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 NEK11Q8NG66 645 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 STAMQ92783 540 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 BRIP1Q9BX63 1249 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 PSD3Q9NYI0 1048 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 COPB1P53618 953 aaKnown RBP13.89□□□□□ -0.19
NPC1-202ENST00000540608 EXOC4Q96A65 974 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 NAPGQ99747 312 aaPredicted RBP13.89□□□□□ -0.19
NPC1-202ENST00000540608 BLZF1Q9H2G9 400 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 ZNF804BA4D1E1 1349 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 TULP2O00295 520 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 ERLIN1O75477 346 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 ARHGAP25P42331 645 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 GYG1P46976 350 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 PIP4K2BP78356 416 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 PAK1Q13153 545 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 WHAMMP3Q1A5X7 153 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 TCP11X2Q5H9J9 407 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 MARCH10Q8NA82 808 aaPredicted RBP13.88□□□□□ -0.19
NPC1-202ENST00000540608 ANKRD20A12PQ8NF67 263 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 PNKPQ96T60 521 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 CDC5LQ99459 802 aaKnown RBP13.88□□□□□ -0.19
NPC1-202ENST00000540608 MTRQ99707 1265 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 VPS16Q9H269 839 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
NPC1-202ENST00000540608 DUOX1Q9NRD9 1551 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 RNF225M0QZC1 329 aaPredicted RBP13.88□□□□□ -0.19
NPC1-202ENST00000540608 COBLO75128 1261 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 IL17AQ16552 155 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 MUM1L1Q5H9M0 696 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
NPC1-202ENST00000540608 NUP88Q99567 741 aaPredicted RBP13.88□□□□□ -0.19
NPC1-202ENST00000540608 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 ADAM21Q9UKJ8 722 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 SPATA31A1Q5TZJ5 1347 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 CYP2D7A0A087X1C5 515 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 KCNJ18B7U540 433 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 H3BQF6 201 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 ABL1P00519 1130 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 KCNJ12Q14500 433 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
NPC1-202ENST00000540608 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 L1RE1Q9UN81 338 aa13.88□□□□□ -0.19
NPC1-202ENST00000540608 RREB1Q92766 1687 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CNTNAP5Q8WYK1 1306 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
NPC1-202ENST00000540608 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 TUBBP07437 444 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 TAB2Q9NYJ8 693 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CICQ96RK0 1608 aaPredicted RBP13.87□□□□□ -0.19
NPC1-202ENST00000540608 LAMB2P55268 1798 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CTAGE15A4D2H0 777 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CTAGE8P0CG41 777 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CDC25AP30304 524 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 NLRP5P59047 1200 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 DYNLL1P63167 89 aaKnown RBP13.87□□□□□ -0.19
NPC1-202ENST00000540608 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 PIK3AP1Q6ZUJ8 805 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CTAGE6Q86UF2 777 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CTAGE4Q8IX94 777 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
NPC1-202ENST00000540608 ABCB6Q9NP58 842 aa13.87□□□□□ -0.19
NPC1-202ENST00000540608 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 H7C1D1 291 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 RPN1P04843 607 aaKnown RBP13.86□□□□□ -0.19
NPC1-202ENST00000540608 SCG2P13521 617 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 KRT9P35527 623 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 IRX5P78411 483 aaPredicted RBP13.86□□□□□ -0.19
NPC1-202ENST00000540608 TAF1P21675 1872 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 MYH8P13535 1937 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 MCM7P33993 719 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 MCM6Q14566 821 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 ARL6IP4Q66PJ3 421 aaKnown RBP13.86□□□□□ -0.19
NPC1-202ENST00000540608 GBP3Q9H0R5 595 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 PDE11AQ9HCR9 933 aa13.86□□□□□ -0.19
NPC1-202ENST00000540608 EIF3JO75822 258 aaKnown RBP13.85□□□□□ -0.19
NPC1-202ENST00000540608 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
NPC1-202ENST00000540608 GYS2P54840 703 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 AMPD2Q01433 879 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
NPC1-202ENST00000540608 ERFEQ4G0M1 354 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 SLF1Q9BQI6 1058 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 CDCA7Q9BWT1 371 aaPredicted RBP13.85□□□□□ -0.19
NPC1-202ENST00000540608 MYO6Q9UM54 1294 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
NPC1-202ENST00000540608 EPN1Q9Y6I3 576 aaPredicted RBP13.85□□□□□ -0.19
NPC1-202ENST00000540608 CACNA1SQ13698 1873 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 ORC4O43929 436 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 PRCPP42785 496 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 UBXN1Q04323 297 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 C4orf32Q8N8J7 132 aa13.85□□□□□ -0.19
NPC1-202ENST00000540608 USP17L12C9JPN9 530 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 USP17L21D6R901 530 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 KCNQ2O43526 872 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
NPC1-202ENST00000540608 UBE4AQ14139 1066 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms