RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 TIFAQ96CG3 184 aa14.1□□□□□ -0.15
CLSTN3-209ENST00000539982 MMP19Q99542 508 aa14.1□□□□□ -0.15
CLSTN3-209ENST00000539982 CRNKL1Q9BZJ0 848 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-209ENST00000539982 ARHGEF10LQ9HCE6 1279 aa14.1□□□□□ -0.15
CLSTN3-209ENST00000539982 ADAMTS5Q9UNA0 930 aa14.1□□□□□ -0.15
CLSTN3-209ENST00000539982 TMX2Q9Y320 296 aa14.1□□□□□ -0.15
CLSTN3-209ENST00000539982 MUC3AQ02505 3323 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 TIMP1P01033 207 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 PGK2P07205 417 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 AKR1A1P14550 325 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 TAL1P17542 331 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 ACLYP53396 1101 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 EVX2Q03828 476 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 KCTD2Q14681 263 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 SPICE1Q8N0Z3 855 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 NUP133Q8WUM0 1156 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 ATXN2LQ8WWM7 1075 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 SH2D4AQ9H788 454 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 VCPKMTQ9H867 229 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 SWAP70Q9UH65 585 aa14.09□□□□□ -0.15
CLSTN3-209ENST00000539982 WDR46O15213 610 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 ADAMTS4O75173 837 aa14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 TTF1Q15361 905 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 AKNAD1Q5T1N1 836 aa14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 MFSD5Q6N075 450 aa14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 RIOX2Q8IUF8 465 aa14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 GAS2L1Q99501 681 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.08□□□□□ -0.162e-7■■■□□ 16.1
CLSTN3-209ENST00000539982 STARD7Q9NQZ5 370 aa14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 CNPY2Q9Y2B0 182 aa14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 ROBO3Q96MS0 1386 aa14.08□□□□□ -0.16
CLSTN3-209ENST00000539982 MOXD2PA6NHM9 499 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 STAT3P40763 770 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 ICA1Q05084 483 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 SLC9C2Q5TAH2 1124 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 CCDC174Q6PII3 467 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 C16orf59Q7L2K0 433 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 KLHDC9Q8NEP7 349 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 PPM1EQ8WY54 764 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 ASB2Q96Q27 587 aa14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 DCP1AQ9NPI6 582 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-209ENST00000539982 VWA5AO00534 786 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 CYP2D6P10635 497 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 AKR1B1P15121 316 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 PDE6AP16499 860 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 COPB2P35606 906 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 PPIGQ13427 754 aaKnown RBP eCLIP14.06□□□□□ -0.164e-7■■□□□ 12.8
CLSTN3-209ENST00000539982 KCNA10Q16322 511 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 RASIP1Q5U651 963 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 ZKSCAN2Q63HK3 967 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 CCSAPQ6IQ19 270 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 CLEC10AQ8IUN9 316 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 MSL3Q8N5Y2 521 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 SDR42E1Q8WUS8 393 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 LENG1Q96BZ8 264 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 DYNLL2Q96FJ2 89 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 PBX4Q9BYU1 374 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 C1orf115Q9H7X2 142 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 TBX21Q9UL17 535 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 FAM184BQ9ULE4 1060 aa14.06□□□□□ -0.16
CLSTN3-209ENST00000539982 GRXCR1A8MXD5 290 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 PBX2P40425 430 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 CDK7P50613 346 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 TMEM240Q5SV17 173 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 CCDC129Q6ZRS4 1044 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 AACSQ86V21 672 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 FBXO28Q9NVF7 368 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 THEGQ9P2T0 379 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 ZNF214Q9UL59 606 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 ELP1O95163 1332 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 MROH7Q68CQ1 1323 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 ZNF532Q9HCE3 1301 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 SYNRGQ9UMZ2 1314 aa14.05□□□□□ -0.16
CLSTN3-209ENST00000539982 NAV1Q8NEY1 1877 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 DUSP11O75319 330 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 MRPS5P82675 430 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 LCORLQ8N3X6 602 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 TMEM199Q8N511 208 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 ADAMTS19Q8TE59 1207 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 GLT1D1Q96MS3 346 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 ATP8A2Q9NTI2 1148 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 PPP1R9AQ9ULJ8 1098 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 PARP14Q460N5 1801 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 PLXNA1Q9UIW2 1896 aa14.04□□□□□ -0.16
CLSTN3-209ENST00000539982 TCRBV5S4A2TA0A5A2 114 aa14.03□□□□□ -0.16
CLSTN3-209ENST00000539982 SNAI1O95863 264 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-209ENST00000539982 CSF2RAP15509 400 aa14.03□□□□□ -0.16
CLSTN3-209ENST00000539982 CST5P28325 142 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-209ENST00000539982 CDK8P49336 464 aa14.03□□□□□ -0.16
CLSTN3-209ENST00000539982 MAMDC4Q6UXC1 1216 aa14.03□□□□□ -0.16
CLSTN3-209ENST00000539982 ZNF365Q70YC5 407 aa14.03□□□□□ -0.16
CLSTN3-209ENST00000539982 PCSK9Q8NBP7 692 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms