RNA–Protein interactions for RNA: ENST00000539972.5

MDM1-209, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-209ENST00000539972 HRASLS5Q96KN8 279 aa6.93□□□□□ -1.3
MDM1-209ENST00000539972 ASCC2Q9H1I8 757 aaPredicted RBP6.93□□□□□ -1.3
MDM1-209ENST00000539972 FAM86C1Q9NVL1 165 aa6.93□□□□□ -1.3
MDM1-209ENST00000539972 PCDHB10Q9UN67 800 aa6.93□□□□□ -1.3
MDM1-209ENST00000539972 PLAGL2Q9UPG8 496 aa6.93□□□□□ -1.3
MDM1-209ENST00000539972 SNX11Q9Y5W9 270 aa6.93□□□□□ -1.3
MDM1-209ENST00000539972 KLF4O43474 513 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 LRRN2O75325 713 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 TP53P04637 393 aaPredicted RBP6.92□□□□□ -1.3
MDM1-209ENST00000539972 JUNBP17275 347 aaPredicted RBP6.92□□□□□ -1.3
MDM1-209ENST00000539972 RAB33AQ14088 237 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 NCAPHQ15003 741 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 C6orf15Q6UXA7 325 aaPredicted RBP6.92□□□□□ -1.3
MDM1-209ENST00000539972 TRIT1Q9H3H1 467 aaKnown RBP6.92□□□□□ -1.3
MDM1-209ENST00000539972 USP35Q9P2H5 1018 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 VAV3Q9UKW4 847 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 PCDHB12Q9Y5F1 795 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 ST14Q9Y5Y6 855 aa6.92□□□□□ -1.3
MDM1-209ENST00000539972 H3BS24 57 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 DDAH1O94760 285 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 PRKCQQ04759 706 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 BNIP3Q12983 259 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 AUHQ13825 339 aaKnown RBP6.91□□□□□ -1.3
MDM1-209ENST00000539972 NBPF9Q3BBW0 867 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
MDM1-209ENST00000539972 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 THAP5Q7Z6K1 395 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 C7orf61Q8IZ16 206 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 KLHL6Q8WZ60 621 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 DNAJC2Q99543 621 aaKnown RBP6.91□□□□□ -1.3
MDM1-209ENST00000539972 GPR62Q9BZJ7 368 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 FBXL21Q9UKT6 434 aa6.91□□□□□ -1.3
MDM1-209ENST00000539972 CD8BP10966 210 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 FUT4P22083 530 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 RBL2Q08999 1139 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
MDM1-209ENST00000539972 PLCL1Q15111 1095 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 DDR2Q16832 855 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 CLEC16AQ2KHT3 1053 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 DCAF15Q66K64 600 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 HEATR6Q6AI08 1181 aaKnown RBP6.9□□□□□ -1.3
MDM1-209ENST00000539972 FAM178BQ8IXR5 827 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 PMFBP1Q8TBY8 1022 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 ASIC4Q96FT7 647 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 HSPA12BQ96MM6 686 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 HAUS7Q99871 368 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 PITPNM2Q9BZ72 1349 aa6.9□□□□□ -1.3
MDM1-209ENST00000539972 B2RBV5 119 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 RBAK-RBAKDNI3L0D1 243 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 PAPLNO95428 1278 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 NAT2P11245 290 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 SNW1Q13573 536 aaKnown RBP6.89□□□□□ -1.31
MDM1-209ENST00000539972 TCEAL1Q15170 157 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 AOC3Q16853 763 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 ZNF792Q3KQV3 632 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 CELF2-AS1Q8N7Q2 184 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 ASB11Q8WXH4 323 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 PRDM14Q9GZV8 571 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 GBP3Q9H0R5 595 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
MDM1-209ENST00000539972 SHOXO15266 292 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 CBFA2T2O43439 604 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 SIGLEC6O43699 453 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 GJB6O95452 261 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 SRFP11831 508 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 ITGA4P13612 1032 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
MDM1-209ENST00000539972 TMC3Q7Z5M5 1100 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 ENOX1Q8TC92 643 aaKnown RBP6.88□□□□□ -1.31
MDM1-209ENST00000539972 DUSP15Q9H1R2 295 aaPredicted RBP6.88□□□□□ -1.31
MDM1-209ENST00000539972 ST7Q9NRC1 585 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 SEMA3GQ9NS98 782 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 GFOD1Q9NXC2 390 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 SIRPGQ9P1W8 387 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 ZSWIM5Q9P217 1185 aa6.88□□□□□ -1.31
MDM1-209ENST00000539972 SHISA3A0PJX4 238 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 ANKRD34BA5PLL1 514 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 EPHX1P07099 455 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 CD247P20963 164 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 TPP2P29144 1249 aaPredicted RBP6.87□□□□□ -1.31
MDM1-209ENST00000539972 CD96P40200 585 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
MDM1-209ENST00000539972 NOL9Q5SY16 702 aaKnown RBP6.87□□□□□ -1.31
MDM1-209ENST00000539972 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 TMPRSS7Q7RTY8 843 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 TSPYL5Q86VY4 417 aaPredicted RBP6.87□□□□□ -1.31
MDM1-209ENST00000539972 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
MDM1-209ENST00000539972 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 UBE2FQ969M7 185 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 DSCC1Q9BVC3 393 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 HDAC8Q9BY41 377 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 KLHL25Q9H0H3 589 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 GP6Q9HCN6 339 aa6.87□□□□□ -1.31
MDM1-209ENST00000539972 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
MDM1-209ENST00000539972 WHRNQ9P202 907 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms