RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 SIRT2Q8IXJ6 389 aa23.47■■□□□ 1.35
C1RL-207ENST00000539927 MAML3Q96JK9 1138 aa23.47■■□□□ 1.35
C1RL-207ENST00000539927 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.47■■□□□ 1.35
C1RL-207ENST00000539927 COG6Q9Y2V7 657 aa23.47■■□□□ 1.35
C1RL-207ENST00000539927 USP17L12C9JPN9 530 aa23.46■■□□□ 1.35
C1RL-207ENST00000539927 USP17L21D6R901 530 aa23.46■■□□□ 1.35
C1RL-207ENST00000539927 WDR46O15213 610 aaKnown RBP23.46■■□□□ 1.35
C1RL-207ENST00000539927 MS4A1P11836 297 aa23.46■■□□□ 1.35
C1RL-207ENST00000539927 ADCYAP1R1P41586 468 aa23.46■■□□□ 1.35
C1RL-207ENST00000539927 TRIM60Q495X7 471 aa23.46■■□□□ 1.35
C1RL-207ENST00000539927 FAM47AQ5JRC9 791 aa23.46■■□□□ 1.35
C1RL-207ENST00000539927 POTEB2H3BUK9 544 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 RAB11FIP3O75154 756 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 TMEM132BQ14DG7 1078 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 LRRC41Q15345 812 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 C12orf60Q5U649 245 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 ABRAQ8N0Z2 381 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 DDRGK1Q96HY6 314 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 CCDC17Q96LX7 622 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 FBXO28Q9NVF7 368 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 DDX19BQ9UMR2 479 aa23.45■■□□□ 1.34
C1RL-207ENST00000539927 EYSQ5T1H1 3165 aa23.44■■□□□ 1.34
C1RL-207ENST00000539927 EEF2P13639 858 aaKnown RBP23.44■■□□□ 1.34
C1RL-207ENST00000539927 GUCD1Q96NT3 240 aa23.44■■□□□ 1.34
C1RL-207ENST00000539927 MMP19Q99542 508 aa23.44■■□□□ 1.34
C1RL-207ENST00000539927 SLC4A4Q9Y6R1 1079 aa23.44■■□□□ 1.34
C1RL-207ENST00000539927 ZBED9Q6R2W3 1325 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 SLC25A27O95847 323 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 PGK2P07205 417 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 ATP5JP18859 108 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 SHHQ15465 462 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 ZNF697Q5TEC3 545 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 C16orf86Q6ZW13 317 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 BADQ92934 168 aa23.43■■□□□ 1.34
C1RL-207ENST00000539927 C9orf50Q5SZB4 431 aa23.42■■□□□ 1.34
C1RL-207ENST00000539927 FAM109BQ6ICB4 259 aaPredicted RBP23.42■■□□□ 1.34
C1RL-207ENST00000539927 STK11IPQ8N1F8 1099 aa23.42■■□□□ 1.34
C1RL-207ENST00000539927 HAUS7Q99871 368 aa23.42■■□□□ 1.34
C1RL-207ENST00000539927 ZBTB40Q9NUA8 1239 aa23.42■■□□□ 1.34
C1RL-207ENST00000539927 PRUNE2Q8WUY3 3088 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 RARBP10826 455 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 KCTD2Q14681 263 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 FAM83BQ5T0W9 1011 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 SH3RF1Q7Z6J0 888 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 KANSL2Q9H9L4 492 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 GOPCQ9HD26 462 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 XPNPEP3Q9NQH7 507 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 PDLIM7Q9NR12 457 aa23.41■■□□□ 1.34
C1RL-207ENST00000539927 PGK1P00558 417 aa23.4■■□□□ 1.34
C1RL-207ENST00000539927 STAT3P40763 770 aa23.4■■□□□ 1.34
C1RL-207ENST00000539927 SNX17Q15036 470 aa23.4■■□□□ 1.34
C1RL-207ENST00000539927 UBE3CQ15386 1083 aa23.4■■□□□ 1.34
C1RL-207ENST00000539927 CTR9Q6PD62 1173 aa23.4■■□□□ 1.34
C1RL-207ENST00000539927 RIOX2Q8IUF8 465 aa23.4■■□□□ 1.34
C1RL-207ENST00000539927 TRIM43BA6NCK2 446 aa23.39■■□□□ 1.33
C1RL-207ENST00000539927 TAL1P17542 331 aaPredicted RBP23.39■■□□□ 1.33
C1RL-207ENST00000539927 TRIM43Q96BQ3 446 aaPredicted RBP23.39■■□□□ 1.33
C1RL-207ENST00000539927 TINF2Q9BSI4 451 aa23.39■■□□□ 1.33
C1RL-207ENST00000539927 PUS7LQ9H0K6 701 aaKnown RBP23.39■■□□□ 1.33
C1RL-207ENST00000539927 PPP1R9AQ9ULJ8 1098 aa23.39■■□□□ 1.33
C1RL-207ENST00000539927 ADAMTS5Q9UNA0 930 aa23.39■■□□□ 1.33
C1RL-207ENST00000539927 VWA5AO00534 786 aa23.38■■□□□ 1.33
C1RL-207ENST00000539927 TLE2Q04725 743 aa23.38■■□□□ 1.33
C1RL-207ENST00000539927 ZSCAN25Q6NSZ9 544 aa23.38■■□□□ 1.33
C1RL-207ENST00000539927 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.38■■□□□ 1.33
C1RL-207ENST00000539927 CDH23Q9H251 3354 aa23.37■■□□□ 1.33
C1RL-207ENST00000539927 SMARCA5O60264 1052 aaPredicted RBP23.37■■□□□ 1.33
C1RL-207ENST00000539927 SLC4A3P48751 1232 aa23.37■■□□□ 1.33
C1RL-207ENST00000539927 ZNF792Q3KQV3 632 aa23.37■■□□□ 1.33
C1RL-207ENST00000539927 RNF180Q86T96 592 aa23.37■■□□□ 1.33
C1RL-207ENST00000539927 LENG1Q96BZ8 264 aaPredicted RBP23.37■■□□□ 1.33
C1RL-207ENST00000539927 NUP88Q99567 741 aaPredicted RBP23.37■■□□□ 1.33
C1RL-207ENST00000539927 ZNF214Q9UL59 606 aaPredicted RBP23.37■■□□□ 1.33
C1RL-207ENST00000539927 PHF24Q9UPV7 400 aa23.37■■□□□ 1.33
C1RL-207ENST00000539927 LRRCC1Q9C099 1032 aa23.36■■□□□ 1.33
C1RL-207ENST00000539927 ARPP21Q9UBL0 812 aaPredicted RBP23.36■■□□□ 1.33
C1RL-207ENST00000539927 NRBP1Q9UHY1 535 aa23.36■■□□□ 1.33
C1RL-207ENST00000539927 GBF1Q92538 1859 aa23.35■■□□□ 1.33
C1RL-207ENST00000539927 CDX2Q99626 313 aaPredicted RBP23.35■■□□□ 1.33
C1RL-207ENST00000539927 COL25A1Q9BXS0 654 aaPredicted RBP23.35■■□□□ 1.33
C1RL-207ENST00000539927 CHMP4BQ9H444 224 aaKnown RBP23.35■■□□□ 1.33
C1RL-207ENST00000539927 MKNK2Q9HBH9 465 aa23.35■■□□□ 1.33
C1RL-207ENST00000539927 CNPY2Q9Y2B0 182 aa23.35■■□□□ 1.33
C1RL-207ENST00000539927 A0A1W2PQ45 241 aaPredicted RBP23.34■■□□□ 1.33
C1RL-207ENST00000539927 A0A1W2PQY0 241 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 MINDY4BA8MYZ0 360 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 PQBP1O60828 265 aaKnown RBP23.34■■□□□ 1.33
C1RL-207ENST00000539927 CLTBP09497 229 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 AKR1A1P14550 325 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 C1orf53Q5VUE5 145 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 SNRNP48Q6IEG0 339 aaKnown RBP23.34■■□□□ 1.33
C1RL-207ENST00000539927 REPS2Q8NFH8 660 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 SLF1Q9BQI6 1058 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.34■■□□□ 1.33
C1RL-207ENST00000539927 DIS3Q9Y2L1 958 aaKnown RBP23.34■■□□□ 1.33
C1RL-207ENST00000539927 TACC3Q9Y6A5 838 aa23.34■■□□□ 1.33
C1RL-207ENST00000539927 ZNF865P0CJ78 1059 aaPredicted RBP23.33■■□□□ 1.33
C1RL-207ENST00000539927 ITGB8P26012 769 aa23.33■■□□□ 1.33
C1RL-207ENST00000539927 COPB2P35606 906 aa23.33■■□□□ 1.33
C1RL-207ENST00000539927 DDX11Q96FC9 970 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms