RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 USP11P51784 963 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 AK2P54819 239 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 NLRP12P59046 1061 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 FANCCQ00597 558 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 MAP3K12Q12852 859 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 BTG3Q14201 252 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-211ENST00000539921 ITIH4Q14624 930 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 ADRM1Q16186 407 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 TBC1D10BQ4KMP7 808 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-211ENST00000539921 RNF187Q5TA31 235 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-211ENST00000539921 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 LARP1BQ659C4 914 aaKnown RBP6.83□□□□□ -1.32
SNHG1-211ENST00000539921 NAA16Q6N069 864 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-211ENST00000539921 CCNI2Q6ZMN8 369 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-211ENST00000539921 BICDL1Q6ZP65 573 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 RASGRP2Q7LDG7 609 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 FAM177A1Q8N128 213 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-211ENST00000539921 STAG2Q8N3U4 1231 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 AZIN2Q96A70 460 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 PGBD1Q96JS3 809 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 CCT8L2Q96SF2 557 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 CGREF1Q99674 301 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 SELENOOQ9BVL4 669 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 OSBPL1AQ9BXW6 950 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 CENPHQ9H3R5 247 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 PLEKHA4Q9H4M7 779 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 ZSWIM6Q9HCJ5 1215 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 KCNMB3Q9NPA1 279 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 GPCPD1Q9NPB8 672 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 ANO2Q9NQ90 1003 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 GALNT8Q9NY28 637 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 DKK3Q9UBP4 350 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 PALD1Q9ULE6 856 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 SLC12A4Q9UP95 1085 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 SH3GLB1Q9Y371 365 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
SNHG1-211ENST00000539921 JCADQ9P266 1359 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 TRPM2O94759 1503 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 ITSN1Q15811 1721 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 MYH15Q9Y2K3 1946 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PSMD14O00487 310 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 N4BP3O15049 544 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PPIP5K2O43314 1243 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 HSF2BPO75031 334 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 ACADSP16219 412 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CASP14P31944 242 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 MDH1P40925 334 aaKnown RBP6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CCT8P50990 548 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CLCN2P51788 898 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 HNRNPMP52272 730 aaKnown RBP eCLIP6.82□□□□□ -1.32
SNHG1-211ENST00000539921 MXRA7P84157 204 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 MYL5Q02045 173 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 SAFB2Q14151 953 aaKnown RBP eCLIP6.82□□□□□ -1.32
SNHG1-211ENST00000539921 NCAPHQ15003 741 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 E2F5Q15329 346 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PPP1R15BQ5SWA1 713 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CFAP58Q5T655 872 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 WDR78Q5VTH9 848 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 IRGCQ6NXR0 463 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CEP85Q6P2H3 762 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 ZNF365Q70YC5 407 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 TRAPPC11Q7Z392 1133 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 SLF2Q8IX21 1173 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CACNA2D3Q8IZS8 1091 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 FNBP4Q8N3X1 1017 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PPP1R14CQ8TAE6 165 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 TRPC4APQ8TEL6 797 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 IFT81Q8WYA0 676 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CCT6BQ92526 530 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 ITPKCQ96DU7 683 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CYFIP2Q96F07 1278 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 STAMBPL1Q96FJ0 436 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 HAPLN3Q96S86 360 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PLEKHF1Q96S99 279 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CORO1BQ9BR76 489 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 LLPHQ9BRT6 129 aaKnown RBP6.82□□□□□ -1.32
SNHG1-211ENST00000539921 TIPINQ9BVW5 301 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 EPC1Q9H2F5 836 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 HELLSQ9NRZ9 838 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 KIAA1468Q9P260 1216 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PDP2Q9P2J9 529 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 HDAC6Q9UBN7 1215 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CROTQ9UKG9 612 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 CEP131Q9UPN4 1083 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 TTLL3Q9Y4R7 772 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 SNX14Q9Y5W7 946 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 NR2E3Q9Y5X4 410 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 BZW2Q9Y6E2 419 aaKnown RBP6.82□□□□□ -1.32
SNHG1-211ENST00000539921 COMMD3-BMI1R4GMX3 469 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 PLCH2O75038 1416 aa6.82□□□□□ -1.32
SNHG1-211ENST00000539921 RAPGEF6Q8TEU7 1601 aa6.81□□□□□ -1.32
SNHG1-211ENST00000539921 FRMD3A2A2Y4 597 aa6.81□□□□□ -1.32
SNHG1-211ENST00000539921 VPS37CA5D8V6 355 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-211ENST00000539921 LRRC10BA6NIK2 292 aa6.81□□□□□ -1.32
SNHG1-211ENST00000539921 TMEM110-MUSTN1A8MSY1 372 aa6.81□□□□□ -1.32
SNHG1-211ENST00000539921 CYTH3O43739 400 aa6.81□□□□□ -1.32
SNHG1-211ENST00000539921 STRNO43815 780 aa6.81□□□□□ -1.32
SNHG1-211ENST00000539921 USO1O60763 962 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms