RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CHD1LQ86WJ1 897 aa20■□□□□ 0.79
DDB1-215ENST00000539712 PLEKHM2Q8IWE5 1019 aa20■□□□□ 0.79
DDB1-215ENST00000539712 ZNF444Q8N0Y2 327 aaPredicted RBP20■□□□□ 0.79
DDB1-215ENST00000539712 REPS2Q8NFH8 660 aa20■□□□□ 0.79
DDB1-215ENST00000539712 DIS3LQ8TF46 1054 aaKnown RBP20■□□□□ 0.79
DDB1-215ENST00000539712 CEP95Q96GE4 821 aa20■□□□□ 0.79
DDB1-215ENST00000539712 NUP88Q99567 741 aaPredicted RBP20■□□□□ 0.79
DDB1-215ENST00000539712 NAPBQ9H115 298 aa20■□□□□ 0.79
DDB1-215ENST00000539712 GOPCQ9HD26 462 aa20■□□□□ 0.79
DDB1-215ENST00000539712 INCENPQ9NQS7 918 aa20■□□□□ 0.79
DDB1-215ENST00000539712 MTMR4Q9NYA4 1195 aa20■□□□□ 0.79
DDB1-215ENST00000539712 OGDHLQ9ULD0 1010 aa20■□□□□ 0.79
DDB1-215ENST00000539712 A0A0D9SFI3 127 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 F5H6K3 240 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 SLC34A2O95436 690 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 NDUFB10O96000 172 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 CCND3P30281 292 aaPredicted RBP19.99■□□□□ 0.79
DDB1-215ENST00000539712 KLRC3Q07444 240 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 LHX8Q68G74 356 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 TICAM2Q86XR7 235 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 NEDD1Q8NHV4 660 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 PAWRQ96IZ0 340 aaKnown RBP19.99■□□□□ 0.79
DDB1-215ENST00000539712 OSBPL3Q9H4L5 887 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 HELLSQ9NRZ9 838 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 CLIP2Q9UDT6 1046 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 PPP1R9AQ9ULJ8 1098 aa19.99■□□□□ 0.79
DDB1-215ENST00000539712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.99■□□□□ 0.79
DDB1-215ENST00000539712 PLIN4Q96Q06 1357 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 VWA5AO00534 786 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 STRNO43815 780 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 COBLO75128 1261 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 ADORA2AP29274 412 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 ALX1Q15699 326 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 FAM47AQ5JRC9 791 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 ZNF287Q9HBT7 754 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 CWC22Q9HCG8 908 aaKnown RBP19.98■□□□□ 0.79
DDB1-215ENST00000539712 IVNS1ABPQ9Y6Y0 642 aa19.98■□□□□ 0.79
DDB1-215ENST00000539712 PLS1Q14651 629 aa19.97■□□□□ 0.79
DDB1-215ENST00000539712 ANKLE1Q8NAG6 615 aa19.97■□□□□ 0.79
DDB1-215ENST00000539712 DPF3Q92784 378 aa19.97■□□□□ 0.79
DDB1-215ENST00000539712 MROH8Q9H579 483 aa19.97■□□□□ 0.79
DDB1-215ENST00000539712 ANAPC4Q9UJX5 808 aa19.97■□□□□ 0.79
DDB1-215ENST00000539712 ZNF214Q9UL59 606 aaPredicted RBP19.97■□□□□ 0.79
DDB1-215ENST00000539712 COL11A1P12107 1806 aaPredicted RBP19.97■□□□□ 0.79
DDB1-215ENST00000539712 ZNF236Q9UL36 1845 aa19.97■□□□□ 0.79
DDB1-215ENST00000539712 TFAP4Q01664 338 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 PDE4BQ07343 736 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 NMIQ13287 307 aaPredicted RBP19.96■□□□□ 0.79
DDB1-215ENST00000539712 MCMDC2Q4G0Z9 681 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 SAMD1Q6SPF0 538 aaPredicted RBP19.96■□□□□ 0.79
DDB1-215ENST00000539712 ZNF589Q86UQ0 364 aaPredicted RBP19.96■□□□□ 0.79
DDB1-215ENST00000539712 ABRAQ8N0Z2 381 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 TRPV1Q8NER1 839 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 HTATIP2Q9BUP3 242 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 SYNPO2Q9UMS6 1093 aa19.96■□□□□ 0.79
DDB1-215ENST00000539712 RAD21O60216 631 aa19.95■□□□□ 0.78
DDB1-215ENST00000539712 TTLL1O95922 423 aa19.95■□□□□ 0.78
DDB1-215ENST00000539712 FGRP09769 529 aa19.95■□□□□ 0.78
DDB1-215ENST00000539712 CYP2C19P33261 490 aa19.95■□□□□ 0.78
DDB1-215ENST00000539712 NCAPG2Q86XI2 1143 aa19.95■□□□□ 0.78
DDB1-215ENST00000539712 RIOX2Q8IUF8 465 aa19.95■□□□□ 0.78
DDB1-215ENST00000539712 IL17RBQ9NRM6 502 aa19.95■□□□□ 0.78
DDB1-215ENST00000539712 MYH4Q9Y623 1939 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 FGAP02671 866 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 SLC3A2P08195 630 aaKnown RBP19.94■□□□□ 0.78
DDB1-215ENST00000539712 TSPY3P0CV98 308 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 TSPY8P0CW00 308 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 STAT3P40763 770 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 HABP4Q5JVS0 413 aaKnown RBP19.94■□□□□ 0.78
DDB1-215ENST00000539712 MFSD14CQ5VZR4 134 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 OLFML2BQ68BL8 750 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 NECAB2Q7Z6G3 386 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 DPP9Q86TI2 863 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 LRRC47Q8N1G4 583 aaKnown RBP19.94■□□□□ 0.78
DDB1-215ENST00000539712 GMCL1P1Q8NEA9 526 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 SLF1Q9BQI6 1058 aa19.94■□□□□ 0.78
DDB1-215ENST00000539712 COLQQ9Y215 455 aaPredicted RBP19.94■□□□□ 0.78
DDB1-215ENST00000539712 TRIOBPQ9H2D6 2365 aa19.93■□□□□ 0.78
DDB1-215ENST00000539712 TRIM6-TRIM34B2RNG4 842 aa19.93■□□□□ 0.78
DDB1-215ENST00000539712 SLC25A27O95847 323 aa19.93■□□□□ 0.78
DDB1-215ENST00000539712 HSPD1P10809 573 aaKnown RBP19.93■□□□□ 0.78
DDB1-215ENST00000539712 NOVP48745 357 aa19.93■□□□□ 0.78
DDB1-215ENST00000539712 ALPK3Q96L96 1907 aa19.93■□□□□ 0.78
DDB1-215ENST00000539712 SZT2Q5T011 3432 aa19.93■□□□□ 0.78
DDB1-215ENST00000539712 ORC4O43929 436 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 NMT2O60551 498 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 COL6A1P12109 1028 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 FCER1AP12319 257 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 CYBAP13498 195 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 SDSP20132 328 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 PRPF38AQ8NAV1 312 aaKnown RBP19.92■□□□□ 0.78
DDB1-215ENST00000539712 RILPL2Q969X0 211 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 NBPF3Q9H094 633 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 RIPK3Q9Y572 518 aa19.92■□□□□ 0.78
DDB1-215ENST00000539712 ZNFX1Q9P2E3 1918 aaKnown RBP19.92■□□□□ 0.78
DDB1-215ENST00000539712 SLFN13Q68D06 897 aa19.91■□□□□ 0.78
DDB1-215ENST00000539712 MAML3Q96JK9 1138 aa19.91■□□□□ 0.78
DDB1-215ENST00000539712 PRO3102Q9H379 93 aa19.91■□□□□ 0.78
DDB1-215ENST00000539712 PFASO15067 1338 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms