RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 MPHOSPH6Q99547 160 aaKnown RBP6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 UPF3BQ9BZI7 483 aaKnown RBP6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NUP62CLQ9H1M0 184 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TMEM165Q9HC07 324 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TUBGCP4Q9UGJ1 667 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TMCO1Q9UM00 188 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 C15orf41Q9Y2V0 281 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 FPGT-TNNI3KV9GXZ4 949 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 BCL9O00512 1426 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LTBP4Q8N2S1 1624 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LRP6O75581 1613 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ZSCAN12O43309 604 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 VIMP08670 466 aaKnown RBP6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LMNB2Q03252 620 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SGSM1Q2NKQ1 1148 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CCDC181Q5TID7 509 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SYNE3Q6ZMZ3 975 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 KIAA0825Q8IV33 1275 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 DNAJC10Q8IXB1 793 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CCDC13Q8IYE1 715 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 RUFY2Q8WXA3 655 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PPP2R3CQ969Q6 453 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CORO1BQ9BR76 489 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NACA2Q9H009 215 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 BOLA2Q9H3K6 86 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CLSTN2Q9H4D0 955 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TBC1D7Q9P0N9 293 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 WDR35Q9P2L0 1181 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CIDEBQ9UHD4 219 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 DBNLQ9UJU6 430 aaKnown RBP6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 G3BP2Q9UN86 482 aaKnown RBP6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SNX14Q9Y5W7 946 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CREB3O43889 395 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 KIAA0754O94854 1291 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 F13A1P00488 732 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SLC7A5Q01650 507 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LACTB2Q53H82 288 aaPredicted RBP6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SRGAP1Q7Z6B7 1085 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LCA5Q86VQ0 697 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PLEKHA4Q9H4M7 779 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 KAT14Q9H8E8 782 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GDPD2Q9HCC8 539 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ITGB4P16144 1822 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LUC7L3O95232 432 aaKnown RBP6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 USP11P51784 963 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LBRQ14739 615 aaKnown RBP6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SOGA3Q5TF21 947 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SESTD1Q86VW0 696 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 RASEFQ8IZ41 740 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 RASSF8Q8NHQ8 419 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 P3H4Q92791 437 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TSC22D3Q99576 134 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ISCA1Q9BUE6 129 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TPCN1Q9ULQ1 816 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ZNF330Q9Y3S2 320 aaPredicted RBP6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TMEM232C9JQI7 657 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 HIP1O00291 1037 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 KRT38O76015 456 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 STARD3NLO95772 234 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GNAT1P11488 350 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ZNF165P49910 485 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ATP2B2Q01814 1243 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PTH1RQ03431 593 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TCIRG1Q13488 830 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ATG9AQ7Z3C6 839 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SPIRE2Q8WWL2 714 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 FAM227BQ96M60 508 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SLC4A9Q96Q91 983 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NAT10Q9H0A0 1025 aaKnown RBP6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PCDH18Q9HCL0 1135 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ABCB6Q9NP58 842 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ATXN10Q9UBB4 475 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 HDAC6Q9UBN7 1215 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CHMP3Q9Y3E7 222 aa6.44□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GOLGA6L7A0A1B0GV03 622 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 DNAJC8O75937 253 aaPredicted RBP6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 URI1O94763 535 aaPredicted RBP6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CCDC166P0CW27 439 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 EPB41P11171 864 aaKnown RBP6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PDHBP11177 359 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ATP4AP20648 1035 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 HDAC4P56524 1084 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NMIQ13287 307 aaPredicted RBP6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 USH1GQ495M9 461 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ARMCX5Q6P1M9 558 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 FAM76AQ8TAV0 307 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NEK9Q8TD19 979 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 BCAS4Q8TDM0 211 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 FSD1Q9BTV5 496 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TRAIPQ9BWF2 469 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LUC7LQ9NQ29 371 aaKnown RBP6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SNRKQ9NRH2 765 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ZFATQ9P243 1243 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 WNK3Q9BYP7 1800 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 A0A0D9SFI3 127 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LRRIQ3A6PVS8 624 aaPredicted RBP6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 MBD4O95243 580 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ALADP13716 330 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PSMD7P51665 324 aa6.43□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CCDC92Q53HC0 331 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms