RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 RPAP2Q8IXW5 612 aaPredicted RBP9.79□□□□□ -0.84
CD4-209ENST00000539492 SPICE1Q8N0Z3 855 aa9.79□□□□□ -0.84
CD4-209ENST00000539492 MAML3Q96JK9 1138 aa9.79□□□□□ -0.84
CD4-209ENST00000539492 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.79□□□□□ -0.84
CD4-209ENST00000539492 PRDM5Q9NQX1 630 aaPredicted RBP9.79□□□□□ -0.84
CD4-209ENST00000539492 PDLIM7Q9NR12 457 aa9.79□□□□□ -0.84
CD4-209ENST00000539492 PAG1Q9NWQ8 432 aa9.79□□□□□ -0.84
CD4-209ENST00000539492 PRKAB2O43741 272 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 RAB11FIP3O75154 756 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 MYCNP04198 464 aaPredicted RBP9.78□□□□□ -0.84
CD4-209ENST00000539492 COPB2P35606 906 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 CDK8P49336 464 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 TMEM132BQ14DG7 1078 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 FAM47AQ5JRC9 791 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 C12orf60Q5U649 245 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 C1orf53Q5VUE5 145 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
CD4-209ENST00000539492 C16orf86Q6ZW13 317 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 DDRGK1Q96HY6 314 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 MMP19Q99542 508 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 BOLA2Q9H3K6 86 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 DDX19BQ9UMR2 479 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 ADAMTS5Q9UNA0 930 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 ZBED9Q6R2W3 1325 aa9.78□□□□□ -0.84
CD4-209ENST00000539492 USP17L12C9JPN9 530 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 USP17L21D6R901 530 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 RARBP10826 455 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 ATP5JP18859 108 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 ADCYAP1R1P41586 468 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 UBE3CQ15386 1083 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 SHHQ15465 462 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 PRAMEF19Q5SWL8 479 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 RIOX2Q8IUF8 465 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.77□□□□□ -0.85
CD4-209ENST00000539492 BADQ92934 168 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 FAM161BQ96MY7 647 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 HAUS7Q99871 368 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 KANSL2Q9H9L4 492 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 PPP1R9AQ9ULJ8 1098 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 PHF24Q9UPV7 400 aa9.77□□□□□ -0.85
CD4-209ENST00000539492 DIS3Q9Y2L1 958 aaKnown RBP9.77□□□□□ -0.85
CD4-209ENST00000539492 CYP2D7A0A087X1C5 515 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 TRIM43BA6NCK2 446 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 VWA5AO00534 786 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 EEF2P13639 858 aaKnown RBP9.76□□□□□ -0.85
CD4-209ENST00000539492 STAT3P40763 770 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 KCTD2Q14681 263 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 ZNF792Q3KQV3 632 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 SLFNL1Q499Z3 407 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 C9orf50Q5SZB4 431 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 SH3RF1Q7Z6J0 888 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 RNF180Q86T96 592 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 SIRT2Q8IXJ6 389 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 REPS2Q8NFH8 660 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 FERMT2Q96AC1 680 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 TRIM43Q96BQ3 446 aaPredicted RBP9.76□□□□□ -0.85
CD4-209ENST00000539492 TINF2Q9BSI4 451 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 BCL11AQ9H165 835 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 CHMP4BQ9H444 224 aaKnown RBP9.76□□□□□ -0.85
CD4-209ENST00000539492 XPNPEP3Q9NQH7 507 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 ZBTB40Q9NUA8 1239 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 FBXO28Q9NVF7 368 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 SLC4A4Q9Y6R1 1079 aa9.76□□□□□ -0.85
CD4-209ENST00000539492 SMIM22K7EJ46 135 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 PGK2P07205 417 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 CLTBP09497 229 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 AKR1A1P14550 325 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 SMAD3P84022 425 aaKnown RBP9.75□□□□□ -0.85
CD4-209ENST00000539492 TLE2Q04725 743 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 FAM83BQ5T0W9 1011 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 ZSCAN25Q6NSZ9 544 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 CTR9Q6PD62 1173 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 MSL3Q8N5Y2 521 aaKnown RBP9.75□□□□□ -0.85
CD4-209ENST00000539492 CDX2Q99626 313 aaPredicted RBP9.75□□□□□ -0.85
CD4-209ENST00000539492 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
CD4-209ENST00000539492 SEMA6BQ9H3T3 888 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 ARPP21Q9UBL0 812 aaPredicted RBP9.75□□□□□ -0.85
CD4-209ENST00000539492 ZNF214Q9UL59 606 aaPredicted RBP9.75□□□□□ -0.85
CD4-209ENST00000539492 TACC3Q9Y6A5 838 aa9.75□□□□□ -0.85
CD4-209ENST00000539492 TMEM265A0A087WTH1 108 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 A0A1W2PQ45 241 aaPredicted RBP9.74□□□□□ -0.85
CD4-209ENST00000539492 A0A1W2PQY0 241 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 KIAA0355O15063 1070 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 RAD21O60216 631 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 PGK1P00558 417 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 CHGBP05060 677 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
CD4-209ENST00000539492 TAL1P17542 331 aaPredicted RBP9.74□□□□□ -0.85
CD4-209ENST00000539492 SLF1Q9BQI6 1058 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 TSEN34Q9BSV6 310 aaKnown RBP9.74□□□□□ -0.85
CD4-209ENST00000539492 TEX13BQ9BXU2 312 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
CD4-209ENST00000539492 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 COG6Q9Y2V7 657 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 SYNGAP1Q96PV0 1343 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 GBF1Q92538 1859 aa9.74□□□□□ -0.85
CD4-209ENST00000539492 SPTBN5Q9NRC6 3674 aaKnown RBP9.73□□□□□ -0.85
CD4-209ENST00000539492 PQBP1O60828 265 aaKnown RBP9.73□□□□□ -0.85
CD4-209ENST00000539492 ADAMTS4O75173 837 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms