RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 GRM4Q14833 912 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 KRT40Q6A162 431 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 TATDN1Q6P1N9 297 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 FAM173BQ6P4H8 233 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 LRSAM1Q6UWE0 723 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 TRIM22Q8IYM9 498 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 PNMA1Q8ND90 353 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 LEO1Q8WVC0 666 aaPredicted RBP10.21□□□□□ -0.78
DDB1-213ENST00000539332 SYAP1Q96A49 352 aaPredicted RBP10.21□□□□□ -0.78
DDB1-213ENST00000539332 CCDC17Q96LX7 622 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 AIFM3Q96NN9 605 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.21□□□□□ -0.78
DDB1-213ENST00000539332 SLC26A6Q9BXS9 759 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 TAF1DQ9H5J8 278 aaPredicted RBP10.21□□□□□ -0.78
DDB1-213ENST00000539332 FAM13BQ9NYF5 915 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 PRDM4Q9UKN5 801 aa10.21□□□□□ -0.78
DDB1-213ENST00000539332 U2AF2P26368 475 aaKnown RBP eCLIP10.2□□□□□ -0.781e-10■□□□□ 10.4
DDB1-213ENST00000539332 GUCY1A2P33402 732 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 MAP3K10Q02779 954 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 MAPK8IP2Q13387 824 aaPredicted RBP10.2□□□□□ -0.78
DDB1-213ENST00000539332 PKN1Q16512 942 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 CERKLQ49MI3 558 aaPredicted RBP10.2□□□□□ -0.78
DDB1-213ENST00000539332 CAVIN1Q6NZI2 390 aaKnown RBP10.2□□□□□ -0.78
DDB1-213ENST00000539332 MIGA2Q7L4E1 593 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
DDB1-213ENST00000539332 NUP133Q8WUM0 1156 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 PRIMPOLQ96LW4 560 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 TRAIPQ9BWF2 469 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.2□□□□□ -0.78
DDB1-213ENST00000539332 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
DDB1-213ENST00000539332 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 PLEKHA8P1O95397 391 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 FOSBP53539 338 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 GUCY1B3Q02153 619 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 NBPF12Q5TAG4 269 aaPredicted RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 OTUD7BQ6GQQ9 843 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 CTCFLQ8NI51 663 aaPredicted RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 DCPSQ96C86 337 aaKnown RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 CEP95Q96GE4 821 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 KAT14Q9H8E8 782 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 GJB4Q9NTQ9 266 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 TMEM63CQ9P1W3 806 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 RCOR1Q9UKL0 485 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 CFAP45Q9UL16 551 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 PPP2R3BQ9Y5P8 575 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 UBE2Q2LH0YL09 131 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 MMP1P03956 469 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 KIF5BP33176 963 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 RRP1BQ14684 758 aaKnown RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 SHROOM1Q2M3G4 852 aaPredicted RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 PRAMEF18Q5VWM3 479 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 PNMA8AQ86V59 439 aaPredicted RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 SULF1Q8IWU6 871 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 SRBD1Q8N5C6 995 aaKnown RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 SHISA4Q96DD7 197 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 ZNF396Q96N95 335 aaPredicted RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 CCDC94Q9BW85 323 aaPredicted RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 RBSNQ9H1K0 784 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 MTMR4Q9NYA4 1195 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
DDB1-213ENST00000539332 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
DDB1-213ENST00000539332 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
DDB1-213ENST00000539332 GDF11O95390 407 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 TOP1P11387 765 aaKnown RBP10.18□□□□□ -0.78
DDB1-213ENST00000539332 GNAQP50148 359 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 JAG1P78504 1218 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 ABCB5Q2M3G0 1257 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
DDB1-213ENST00000539332 KRT26Q7Z3Y9 468 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 CLEC10AQ8IUN9 316 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 SPATA32Q96LK8 384 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 USP28Q96RU2 1077 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 POLR3EQ9NVU0 708 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 RTEL1Q9NZ71 1219 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 TFIP11Q9UBB9 837 aaKnown RBP10.18□□□□□ -0.78
DDB1-213ENST00000539332 MAD2L2Q9UI95 211 aa10.18□□□□□ -0.78
DDB1-213ENST00000539332 PHF20L1A8MW92 1017 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 YEATS4O95619 227 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 GH2P01242 217 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 SNHG28P0DPA3 235 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 VEGFAP15692 232 aaPredicted RBP10.17□□□□□ -0.78
DDB1-213ENST00000539332 SMARCA1P28370 1054 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 RBM10P98175 930 aaKnown RBP10.17□□□□□ -0.78
DDB1-213ENST00000539332 TRIM29Q14134 588 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 SLC35G1Q2M3R5 365 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 UVSSAQ2YD98 709 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 TMEM179Q6ZVK1 233 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 CMTR1Q8N1G2 835 aaKnown RBP10.17□□□□□ -0.78
DDB1-213ENST00000539332 HOOK2Q96ED9 719 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 PGBD1Q96JS3 809 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 PHF20Q9BVI0 1012 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 FOXP1Q9H334 677 aaPredicted RBP10.17□□□□□ -0.78
DDB1-213ENST00000539332 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
DDB1-213ENST00000539332 SSC5DA1L4H1 1573 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 DOCK1Q14185 1865 aa10.17□□□□□ -0.78
DDB1-213ENST00000539332 ADM5C9JUS6 153 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms