RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 A0A1W2PQD8 194 aa29.31■■■□□ 2.28
KLHL42-202ENST00000539176 ABCB5Q2M3G0 1257 aa29.31■■■□□ 2.28
KLHL42-202ENST00000539176 ANGEL2Q5VTE6 544 aaKnown RBP29.31■■■□□ 2.28
KLHL42-202ENST00000539176 LINC00301Q8NCQ3 95 aa29.31■■■□□ 2.28
KLHL42-202ENST00000539176 FTOQ9C0B1 505 aaKnown RBP eCLIP29.31■■■□□ 2.28
KLHL42-202ENST00000539176 ME1P48163 572 aa29.31■■■□□ 2.28
KLHL42-202ENST00000539176 TEPSINQ96N21 525 aa29.31■■■□□ 2.28
KLHL42-202ENST00000539176 MAD2L2Q9UI95 211 aa29.31■■■□□ 2.28
KLHL42-202ENST00000539176 TTLL1O95922 423 aa29.3■■■□□ 2.28
KLHL42-202ENST00000539176 GOLGA8HP0CJ92 632 aa29.3■■■□□ 2.28
KLHL42-202ENST00000539176 CNTNAP5Q8WYK1 1306 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 GH2P01242 217 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 TNFAIP1Q13829 316 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 STK38Q15208 465 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 ADALQ6DHV7 355 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 CCAR1Q8IX12 1150 aaKnown RBP29.29■■■□□ 2.28
KLHL42-202ENST00000539176 PIBF1Q8WXW3 757 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 DEXIO95424 95 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 U2AF2P26368 475 aaKnown RBP eCLIP29.29■■■□□ 2.28
KLHL42-202ENST00000539176 FAM160A1Q05DH4 1040 aa29.29■■■□□ 2.28
KLHL42-202ENST00000539176 ESPNB1AK53 854 aa29.28■■■□□ 2.28
KLHL42-202ENST00000539176 KIF28PB7ZC32 967 aa29.28■■■□□ 2.28
KLHL42-202ENST00000539176 KIF5BP33176 963 aa29.28■■■□□ 2.28
KLHL42-202ENST00000539176 USP17L2Q6R6M4 530 aa29.28■■■□□ 2.28
KLHL42-202ENST00000539176 DEFB129Q9H1M3 183 aa29.28■■■□□ 2.28
KLHL42-202ENST00000539176 GGA3Q9NZ52 723 aa29.28■■■□□ 2.28
KLHL42-202ENST00000539176 V9GY48 417 aaPredicted RBP29.28■■■□□ 2.28
KLHL42-202ENST00000539176 USP17L5A8MUK1 530 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 EEF2P13639 858 aaKnown RBP29.27■■■□□ 2.28
KLHL42-202ENST00000539176 TYRO3Q06418 890 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 GNL2Q13823 731 aaKnown RBP29.27■■■□□ 2.28
KLHL42-202ENST00000539176 SLC35G1Q2M3R5 365 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 TMEM179Q6ZVK1 233 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 MRPS27Q92552 414 aaKnown RBP29.27■■■□□ 2.28
KLHL42-202ENST00000539176 MAP3K14Q99558 947 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 CAVIN2O95810 425 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 SF3A1Q15459 793 aaKnown RBP29.27■■■□□ 2.28
KLHL42-202ENST00000539176 CAMK4Q16566 473 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 PRAMEF18Q5VWM3 479 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 ANO1Q5XXA6 986 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 RNF26Q9BY78 433 aaPredicted RBP29.27■■■□□ 2.28
KLHL42-202ENST00000539176 CPVLQ9H3G5 476 aa29.27■■■□□ 2.28
KLHL42-202ENST00000539176 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.27■■■□□ 2.28
KLHL42-202ENST00000539176 SPTLC2O15270 562 aa29.26■■■□□ 2.27
KLHL42-202ENST00000539176 LMOD1P29536 600 aaPredicted RBP29.26■■■□□ 2.27
KLHL42-202ENST00000539176 SIAH1Q8IUQ4 282 aa29.26■■■□□ 2.27
KLHL42-202ENST00000539176 FAM200AQ8TCP9 573 aa29.26■■■□□ 2.27
KLHL42-202ENST00000539176 POLR2AP24928 1970 aaKnown RBP29.26■■■□□ 2.27
KLHL42-202ENST00000539176 PALM3A6NDB9 673 aaPredicted RBP29.25■■■□□ 2.27
KLHL42-202ENST00000539176 KINO60870 393 aaKnown RBP29.25■■■□□ 2.27
KLHL42-202ENST00000539176 SAFBQ15424 915 aaKnown RBP eCLIP29.25■■■□□ 2.27
KLHL42-202ENST00000539176 PKN1Q16512 942 aa29.25■■■□□ 2.27
KLHL42-202ENST00000539176 KANSL2Q9H9L4 492 aa29.25■■■□□ 2.27
KLHL42-202ENST00000539176 PCDHA7Q9UN72 937 aa29.25■■■□□ 2.27
KLHL42-202ENST00000539176 FRMPD2Q68DX3 1309 aaPredicted RBP29.25■■■□□ 2.27
KLHL42-202ENST00000539176 PRPF3O43395 683 aaKnown RBP29.25■■■□□ 2.27
KLHL42-202ENST00000539176 TBC1D12O60347 775 aa29.25■■■□□ 2.27
KLHL42-202ENST00000539176 AKAP17AQ02040 695 aaKnown RBP29.25■■■□□ 2.27
KLHL42-202ENST00000539176 ICA1Q05084 483 aa29.25■■■□□ 2.27
KLHL42-202ENST00000539176 NBPF12Q5TAG4 269 aaPredicted RBP29.25■■■□□ 2.27
KLHL42-202ENST00000539176 CLIC4Q9Y696 253 aa29.25■■■□□ 2.27
KLHL42-202ENST00000539176 SOCS7O14512 581 aa29.24■■■□□ 2.27
KLHL42-202ENST00000539176 PARP1P09874 1014 aaKnown RBP29.24■■■□□ 2.27
KLHL42-202ENST00000539176 PDHBP11177 359 aa29.24■■■□□ 2.27
KLHL42-202ENST00000539176 JMYQ8N9B5 988 aa29.24■■■□□ 2.27
KLHL42-202ENST00000539176 FSIP1Q8NA03 581 aa29.24■■■□□ 2.27
KLHL42-202ENST00000539176 ENGASEQ8NFI3 743 aa29.24■■■□□ 2.27
KLHL42-202ENST00000539176 CABP5Q9NP86 173 aa29.24■■■□□ 2.27
KLHL42-202ENST00000539176 RTN4Q9NQC3 1192 aaKnown RBP29.24■■■□□ 2.27
KLHL42-202ENST00000539176 GRIN3BO60391 1043 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 SASS6Q6UVJ0 657 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 KLRF2D3W0D1 207 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 MMP1P03956 469 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 SNW1Q13573 536 aaKnown RBP29.23■■■□□ 2.27
KLHL42-202ENST00000539176 APOBEC3FQ8IUX4 373 aaKnown RBP29.23■■■□□ 2.27
KLHL42-202ENST00000539176 SHISA4Q96DD7 197 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 GOLPH3LQ9H4A5 285 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 RRAGDQ9NQL2 400 aaPredicted RBP29.23■■■□□ 2.27
KLHL42-202ENST00000539176 ADARB2Q9NS39 739 aaKnown RBP29.23■■■□□ 2.27
KLHL42-202ENST00000539176 NYAP2Q9P242 653 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 MRVI1Q9Y6F6 885 aa29.23■■■□□ 2.27
KLHL42-202ENST00000539176 RAD21O60216 631 aa29.22■■■□□ 2.27
KLHL42-202ENST00000539176 VEGFAP15692 232 aaPredicted RBP29.22■■■□□ 2.27
KLHL42-202ENST00000539176 MAP3K10Q02779 954 aa29.22■■■□□ 2.27
KLHL42-202ENST00000539176 SLC39A14Q15043 492 aa29.22■■■□□ 2.27
KLHL42-202ENST00000539176 ZBTB21Q9ULJ3 1066 aa29.22■■■□□ 2.27
KLHL42-202ENST00000539176 KCNJ14Q9UNX9 436 aa29.22■■■□□ 2.27
KLHL42-202ENST00000539176 CYTH3O43739 400 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 DPY19L2Q6NUT2 758 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 ZSCAN30Q86W11 494 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 CKAP2LQ8IYA6 745 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 FOXP1Q9H334 677 aaPredicted RBP29.21■■■□□ 2.27
KLHL42-202ENST00000539176 CCDC39Q9UFE4 941 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 PPP6R2O75170 966 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 XBP1P17861 261 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 GNAQP50148 359 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 UBA5Q9GZZ9 404 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 GPCPD1Q9NPB8 672 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 VPS54Q9P1Q0 977 aa29.21■■■□□ 2.27
KLHL42-202ENST00000539176 CLCN1P35523 988 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms