RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 DMTNQ08495 405 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.12□□□□□ -0.79
GGA3-202ENST00000538886 RUFY3Q7L099 469 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 SAPCD2Q86UD0 394 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 ZFYVE28Q9HCC9 887 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 PAPPAQ13219 1627 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 CACNA1SQ13698 1873 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 BRD2P25440 801 aaKnown RBP10.12□□□□□ -0.79
GGA3-202ENST00000538886 KCTD2Q14681 263 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 CST9Q5W186 159 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 GIMAP6Q6P9H5 292 aa10.12□□□□□ -0.79
GGA3-202ENST00000538886 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
GGA3-202ENST00000538886 NDUFB10O96000 172 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 C16orf86Q6ZW13 317 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 MTMR4Q9NYA4 1195 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 BAZ2BQ9UIF8 2168 aaKnown RBP10.11□□□□□ -0.79
GGA3-202ENST00000538886 CDKL5O76039 1030 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 HSPA6P17066 643 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 RPS6KB1P23443 525 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 HSPA4P34932 840 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 VEGFBP49765 207 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 BACE1P56817 501 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 LARP1BQ659C4 914 aaKnown RBP10.11□□□□□ -0.79
GGA3-202ENST00000538886 SNRNP48Q6IEG0 339 aaKnown RBP10.11□□□□□ -0.79
GGA3-202ENST00000538886 ENAHQ8N8S7 591 aaPredicted RBP10.11□□□□□ -0.79
GGA3-202ENST00000538886 MRIQ9BWK5 157 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 LIMCH1Q9UPQ0 1083 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 TAL1P17542 331 aaPredicted RBP10.11□□□□□ -0.79
GGA3-202ENST00000538886 COA7Q96BR5 231 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 CCDC43Q96MW1 224 aaKnown RBP10.11□□□□□ -0.79
GGA3-202ENST00000538886 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
GGA3-202ENST00000538886 OFD1O75665 1012 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 FKBP1CQ5VVH2 108 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 RAET1EQ8TD07 263 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 ATG4CQ96DT6 458 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 TMEM87BQ96K49 555 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 ZIC5Q96T25 663 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 PCDHA1Q9Y5I3 950 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 SALL3Q9BXA9 1300 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 CHD4Q14839 1912 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 CCNA1P78396 465 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 FSTL1Q12841 308 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 JAKMIP3Q5VZ66 844 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 ANO1Q5XXA6 986 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 STOX1Q6ZVD7 989 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 NEDD1Q8NHV4 660 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 SAMM50Q9Y512 469 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 TRIM17Q9Y577 477 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 PDS5AQ29RF7 1337 aaKnown RBP10.1□□□□□ -0.79
GGA3-202ENST00000538886 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 CLSTN1O94985 981 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 GNAQP50148 359 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
GGA3-202ENST00000538886 WDR33Q9C0J8 1336 aaKnown RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 SCN7AQ01118 1682 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 SPDYE3A6NKU9 549 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 MMP14P50281 582 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 COG2Q14746 738 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 STAG2Q8N3U4 1231 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 FANCBQ8NB91 859 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 STAG1Q8WVM7 1258 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 PIGSQ96S52 555 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L15C9J2P7 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L13C9JLJ4 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L11C9JVI0 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L18D6R9N7 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L22D6RA61 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L17D6RBQ6 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L19D6RCP7 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L20D6RJB6 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 ITGBL1O95965 494 aaPredicted RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 HOXA13P31271 388 aaPredicted RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 USP17L24Q0WX57 530 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 NECTIN1Q15223 517 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 SECISBP2LQ93073 1101 aaKnown RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 CCDC94Q9BW85 323 aaPredicted RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 VCAM1P19320 739 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 MTMR14Q8NCE2 650 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 WNK4Q96J92 1243 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 PARK7Q99497 189 aaKnown RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 P2RX7Q99572 595 aaKnown RBP10.09□□□□□ -0.79
GGA3-202ENST00000538886 VCPKMTQ9H867 229 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 TMEM51Q9NW97 253 aa10.09□□□□□ -0.79
GGA3-202ENST00000538886 CEP290O15078 2479 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 CCDC194A0A1B0GVG4 234 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 MANSC4A6NHS7 340 aaPredicted RBP10.08□□□□□ -0.8
GGA3-202ENST00000538886 STAT3P40763 770 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 SPRYD7Q5W111 196 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 SLF1Q9BQI6 1058 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 VPS54Q9P1Q0 977 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
GGA3-202ENST00000538886 KIF20AO95235 890 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 PPATQ06203 517 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 CCDC173Q0VFZ6 552 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 SBK1Q52WX2 424 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms