RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FZD9O00144 591 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 FUT2Q10981 343 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 CMTR1Q8N1G2 835 aaKnown RBP16.57■□□□□ 0.24
CDCA3-207ENST00000538862 OXER1Q8TDS5 423 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-207ENST00000538862 INTS13Q9NVM9 706 aa16.57■□□□□ 0.24
CDCA3-207ENST00000538862 LTBP1Q14766 1721 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 TMEM232C9JQI7 657 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 PRR29P0C7W0 189 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 CALM1P0DP23 149 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 CALM2P0DP24 149 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 CALM3P0DP25 149 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 PKN1Q16512 942 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 ANKRD18AQ8IVF6 992 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
CDCA3-207ENST00000538862 PHF20Q9BVI0 1012 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 CSRNP2Q9H175 543 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 POLLQ9UGP5 575 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 NFE2L3Q9Y4A8 694 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 MYH2Q9UKX2 1941 aa16.56■□□□□ 0.24
CDCA3-207ENST00000538862 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
CDCA3-207ENST00000538862 KRT2P35908 639 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDCA3-207ENST00000538862 KMT5BQ4FZB7 885 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 TMEM139Q8IV31 216 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 REXO1L1PQ8IX06 675 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 PRDM10Q9NQV6 1147 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 BSDC1Q9NW68 430 aaPredicted RBP16.55■□□□□ 0.24
CDCA3-207ENST00000538862 A0A1B0GUL6 1792 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 GOLGA6L9A6NEM1 432 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 C6orf229H3BNL8 230 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 STX10O60499 249 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
CDCA3-207ENST00000538862 PLCD1P51178 756 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 ELF2Q15723 593 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 CAVIN4Q5BKX8 364 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 IFIT1BQ5T764 474 aaKnown RBP16.55■□□□□ 0.24
CDCA3-207ENST00000538862 SPECC1LQ69YQ0 1117 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 IQCA1Q86XH1 822 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 NIM1KQ8IY84 436 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 SUPT20HQ8NEM7 779 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 FERMT2Q96AC1 680 aa16.55■□□□□ 0.24
CDCA3-207ENST00000538862 SRRTQ9BXP5 876 aaKnown RBP16.55■□□□□ 0.24
CDCA3-207ENST00000538862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDCA3-207ENST00000538862 CEP350Q5VT06 3117 aa16.54■□□□□ 0.24
CDCA3-207ENST00000538862 RIMBP2O15034 1052 aa16.54■□□□□ 0.24
CDCA3-207ENST00000538862 TOMM70O94826 608 aa16.54■□□□□ 0.24
CDCA3-207ENST00000538862 GYG1P46976 350 aa16.54■□□□□ 0.24
CDCA3-207ENST00000538862 BRMS1Q9HCU9 246 aa16.54■□□□□ 0.24
CDCA3-207ENST00000538862 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
CDCA3-207ENST00000538862 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
CDCA3-207ENST00000538862 GJA3Q9Y6H8 435 aa16.54■□□□□ 0.24
CDCA3-207ENST00000538862 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-207ENST00000538862 SEMA3EO15041 775 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 DDAH1O94760 285 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 FBXO38Q6PIJ6 1188 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 SH3RF1Q7Z6J0 888 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 SHISA4Q96DD7 197 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 BAG1Q99933 345 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-207ENST00000538862 VPS54Q9P1Q0 977 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 DNAI1Q9UI46 699 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 SLFN14P0C7P3 912 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 ATP2B1P20020 1258 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 EIF6P56537 245 aaKnown RBP16.53■□□□□ 0.24
CDCA3-207ENST00000538862 TROAPQ12815 778 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 NR1I3Q14994 352 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 USP49Q70CQ1 688 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 PDILTQ8N807 584 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 TBC1D16Q8TBP0 767 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDCA3-207ENST00000538862 PPP2R2CQ9Y2T4 447 aa16.53■□□□□ 0.24
CDCA3-207ENST00000538862 V9GYY5 206 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-207ENST00000538862 COL1A1P02452 1464 aaPredicted RBP16.52■□□□□ 0.24
CDCA3-207ENST00000538862 BAZ2AQ9UIF9 1905 aaKnown RBP16.52■□□□□ 0.24
CDCA3-207ENST00000538862 UFL1O94874 794 aa16.52■□□□□ 0.23
CDCA3-207ENST00000538862 TMED8Q6PL24 325 aaPredicted RBP16.52■□□□□ 0.23
CDCA3-207ENST00000538862 TC2NQ8N9U0 490 aa16.52■□□□□ 0.23
CDCA3-207ENST00000538862 FAM84BQ96KN1 310 aaPredicted RBP16.52■□□□□ 0.23
CDCA3-207ENST00000538862 MED15Q96RN5 788 aa16.52■□□□□ 0.23
CDCA3-207ENST00000538862 FAM53CQ9NYF3 392 aa16.52■□□□□ 0.23
CDCA3-207ENST00000538862 MINPP1Q9UNW1 487 aa16.52■□□□□ 0.23
CDCA3-207ENST00000538862 V9GY48 417 aaPredicted RBP16.52■□□□□ 0.23
CDCA3-207ENST00000538862 PDS5AQ29RF7 1337 aaKnown RBP16.51■□□□□ 0.23
CDCA3-207ENST00000538862 A0A1B0GTH6 734 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 H2AFXP16104 143 aaPredicted RBP16.51■□□□□ 0.23
CDCA3-207ENST00000538862 DYNLL1P63167 89 aaKnown RBP16.51■□□□□ 0.23
CDCA3-207ENST00000538862 GRAMD1CQ8IYS0 662 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 DBNDD1Q9H9R9 158 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 SCN4AP35499 1836 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 ORC4O43929 436 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 GABPB1Q06547 395 aaPredicted RBP16.51■□□□□ 0.23
CDCA3-207ENST00000538862 DOK7Q18PE1 504 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 SPATA1Q5VX52 437 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 TMTC3Q6ZXV5 915 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms