RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 TMTC3Q6ZXV5 915 aa7.6□□□□□ -1.19
SORT1-209ENST00000538502 CCDC125Q86Z20 511 aa7.6□□□□□ -1.19
SORT1-209ENST00000538502 TRIM11Q96F44 468 aa7.6□□□□□ -1.19
SORT1-209ENST00000538502 GDAP1L1Q96MZ0 367 aa7.6□□□□□ -1.19
SORT1-209ENST00000538502 CSRNP1Q96S65 589 aa7.6□□□□□ -1.19
SORT1-209ENST00000538502 PYCARDQ9ULZ3 195 aa7.6□□□□□ -1.19
SORT1-209ENST00000538502 PACSIN2Q9UNF0 486 aaPredicted RBP7.6□□□□□ -1.19
SORT1-209ENST00000538502 LMNB1P20700 586 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 COPS6Q7L5N1 327 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 PODNQ7Z5L7 613 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 KIFC3Q9BVG8 833 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 TMOD4Q9NZQ9 345 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 LAMC3Q9Y6N6 1575 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 URB2Q14146 1524 aaKnown RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 ZMYM6O95789 1325 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 SPECC1L-ADORA2AF8WAN1 911 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 NR1I2O75469 434 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 DCTN3O75935 186 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 SLC12A2P55011 1212 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 RNASE9P60153 205 aaKnown RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 CCDC92Q53HC0 331 aaPredicted RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 CYB5RLQ6IPT4 315 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 KBTBD3Q8NAB2 608 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 OLFM3Q96PB7 478 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 SERPINI1Q99574 410 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 JPH2Q9BR39 696 aaPredicted RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 RTEL1Q9NZ71 1219 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 MTMR6Q9Y217 621 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 TRPM2O94759 1503 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 LAD1O00515 517 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 TTI1O43156 1089 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 ADCY8P40145 1251 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 PSMD6Q15008 389 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 HADHQ16836 314 aaKnown RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 TTC6Q86TZ1 520 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 BICC1Q9H694 974 aaKnown RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 SERTAD1Q9UHV2 236 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 INPP1P49441 399 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 CALCRLQ16602 461 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 APLFQ8IW19 511 aaPredicted RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 KLHL29Q96CT2 875 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 CCDC124Q96CT7 223 aaKnown RBP7.59□□□□□ -1.19
SORT1-209ENST00000538502 LRWD1Q9UFC0 647 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 TEX14Q8IWB6 1497 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 NPATQ14207 1427 aa7.59□□□□□ -1.19
SORT1-209ENST00000538502 CFAP73A6NFT4 308 aa7.59□□□□□ -1.2
SORT1-209ENST00000538502 CLCN6P51797 869 aa7.59□□□□□ -1.2
SORT1-209ENST00000538502 PHEXP78562 749 aa7.59□□□□□ -1.2
SORT1-209ENST00000538502 BIRC3Q13489 604 aa7.59□□□□□ -1.2
SORT1-209ENST00000538502 DCUN1D2Q6PH85 259 aa7.59□□□□□ -1.2
SORT1-209ENST00000538502 CHST3Q7LGC8 479 aa7.59□□□□□ -1.2
SORT1-209ENST00000538502 TRIM15Q9C019 465 aa7.59□□□□□ -1.2
SORT1-209ENST00000538502 ACEP12821 1306 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 GPTP24298 496 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 LONP1P36776 959 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 ADCY7P51828 1080 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 ADCY2Q08462 1091 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 C6orf118Q5T5N4 469 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 SRRM1Q8IYB3 904 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 FAM96AQ9H5X1 160 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 PEG3Q9GZU2 1588 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 P4HA1P13674 534 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 PPP2R5AQ15172 486 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 TMEM87AQ8NBN3 555 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 CDKL2Q92772 493 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 ORC6Q9Y5N6 252 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 GPATCH8Q9UKJ3 1502 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 MYO1CO00159 1063 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 RPSAP08865 295 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 HNRNPH2P55795 449 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 RASA3Q14644 834 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 SARM1Q6SZW1 724 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 RSPH3Q86UC2 560 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 MYOCDQ8IZQ8 938 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 CNPY4Q8N129 248 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 NSMCE1Q8WV22 266 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 GSDMAQ96QA5 445 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 MCM9Q9NXL9 1143 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 PA2G4Q9UQ80 394 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 ARHGEF35A5YM69 484 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 C6orf229H3BNL8 230 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 MAPK13O15264 365 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 DAPK3O43293 454 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 XRCC5P13010 732 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 COPB1P53618 953 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 RPS6KA2Q15349 733 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 TTLL7Q6ZT98 887 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 CCDC117Q8IWD4 279 aaPredicted RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 SLC17A8Q8NDX2 589 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 SNX29Q8TEQ0 813 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 TRIM6Q9C030 488 aaPredicted RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 MRPL40Q9NQ50 206 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 BATF3Q9NR55 127 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 TPCN1Q9ULQ1 816 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 MORC2Q9Y6X9 1032 aaPredicted RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 RASGRF2O14827 1237 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 PNMA6AP0CW24 399 aaPredicted RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 GUCY2DQ02846 1103 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 EIF4A2Q14240 407 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 SATB2Q9UPW6 733 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms