RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 BOLA2Q9H3K6 86 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 SEC31BQ9NQW1 1179 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 HOOK1Q9UJC3 728 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 POLR3DP05423 398 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 CYP21A2P08686 494 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 PDE4BQ07343 736 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 ANO1Q5XXA6 986 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 LDHAL6AQ6ZMR3 332 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 AGXT2Q9BYV1 514 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
SEMA4D-221ENST00000537934 ZEB2O60315 1214 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 CLNS1AP54105 237 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 ATP2B2Q01814 1243 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 CCNI2Q6ZMN8 369 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 ENOX1Q8TC92 643 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 NFE2L3Q9Y4A8 694 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 FAM237AA0A1B0GTK4 181 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 FDPSP14324 419 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 CDC27P30260 824 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 RBL2Q08999 1139 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 RPGRIP1Q96KN7 1286 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 NCOA5Q9HCD5 579 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 RIC1Q4ADV7 1423 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 COL4A1P02462 1669 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 A0A1B0GTH6 734 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 EPB41P11171 864 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 BMP6P22004 513 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 CDR1P51861 262 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 CCNHP51946 323 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 TLDC1Q6P9B6 456 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 ZNF483Q8TF39 744 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 EDC3Q96F86 508 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 CNNM1Q9NRU3 951 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
SEMA4D-221ENST00000537934 UTRNP46939 3433 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 ZNF609O15014 1411 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 OPA1O60313 960 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 EZRP15311 586 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 FECHP22830 423 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 SSR1P43307 286 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 DRP2Q13474 957 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 SLC39A14Q15043 492 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 SNCBQ16143 134 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 FOXP4Q8IVH2 680 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 SLC40A1Q9NP59 571 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 PCDHA5Q9Y5H7 936 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 NAP1L1P55209 391 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 EXOSC10Q01780 885 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 ICA1Q05084 483 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 ADCY2Q08462 1091 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 NBPF5PQ86XG9 351 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 CCDC13Q8IYE1 715 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 TATDN2Q93075 761 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 ATP6V0A4Q9HBG4 840 aa12.74□□□□□ -0.37
SEMA4D-221ENST00000537934 LAMB2P55268 1798 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 SLC8A3P57103 927 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 STOX1Q6ZVD7 989 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 ELOA2Q8IYF1 753 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 C8orf76Q96K31 380 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 DACH1Q9UI36 760 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 FAM184BQ9ULE4 1060 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 TAF1P21675 1872 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 MFAP3LO75121 409 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 ABL1P00519 1130 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 FMR1Q06787 632 aaKnown RBP eCLIP12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 NFIXQ14938 502 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 ZNF827Q17R98 1081 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 CCDC152Q4G0S7 254 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 CEP57Q86XR8 500 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 AENQ8WTP8 325 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 SH3GL3Q99963 347 aa12.73□□□□□ -0.37
SEMA4D-221ENST00000537934 COL24A1Q17RW2 1714 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms