RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDB1-209ENST00000537877 FOXD4L4Q8WXT5 416 aaPredicted RBP14.28□□□□□ -0.12
DDB1-209ENST00000537877 CDCA5Q96FF9 252 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 RIOX1Q9H6W3 641 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 VCPKMTQ9H867 229 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 PICK1Q9NRD5 415 aa14.28□□□□□ -0.12
DDB1-209ENST00000537877 V9GY48 417 aaPredicted RBP14.28□□□□□ -0.12
DDB1-209ENST00000537877 FRMPD2Q68DX3 1309 aaPredicted RBP14.28□□□□□ -0.12
DDB1-209ENST00000537877 MYH15Q9Y2K3 1946 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 hCG_1984214I3L0E3 225 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 CYTH3O43739 400 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 BAG4O95429 457 aaKnown RBP14.27□□□□□ -0.12
DDB1-209ENST00000537877 ECE1P42892 770 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 RESTQ13127 1097 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 SLC35G1Q2M3R5 365 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 KRT40Q6A162 431 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 ZNF713Q8N859 430 aaPredicted RBP14.27□□□□□ -0.12
DDB1-209ENST00000537877 ACER1Q8TDN7 264 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 RRP36Q96EU6 259 aaKnown RBP14.27□□□□□ -0.12
DDB1-209ENST00000537877 AIFM3Q96NN9 605 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 FEZ1Q99689 392 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 WDR18Q9BV38 432 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 KIAA1683Q9H0B3 1180 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 AS3MTQ9HBK9 375 aa14.27□□□□□ -0.12
DDB1-209ENST00000537877 PHIPQ8WWQ0 1821 aa14.27□□□□□ -0.13
DDB1-209ENST00000537877 RAD21O60216 631 aa14.26□□□□□ -0.13
DDB1-209ENST00000537877 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
DDB1-209ENST00000537877 BMP3P12645 472 aa14.26□□□□□ -0.13
DDB1-209ENST00000537877 IREB2P48200 963 aaKnown RBP14.26□□□□□ -0.13
DDB1-209ENST00000537877 GUCY1B3Q02153 619 aa14.26□□□□□ -0.13
DDB1-209ENST00000537877 LPAR1Q92633 364 aa14.26□□□□□ -0.13
DDB1-209ENST00000537877 GPCPD1Q9NPB8 672 aa14.26□□□□□ -0.13
DDB1-209ENST00000537877 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
DDB1-209ENST00000537877 SEC63Q9UGP8 760 aaKnown RBP14.26□□□□□ -0.13
DDB1-209ENST00000537877 UBE2Q2LH0YL09 131 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 GOLGA6L22H0YM25 854 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 MMP1P03956 469 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 PTPRAP18433 802 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 MAP3K9P80192 1104 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 KIF23Q02241 960 aaPredicted RBP14.25□□□□□ -0.13
DDB1-209ENST00000537877 SAFBQ15424 915 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDB1-209ENST00000537877 NFKBIBQ15653 356 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 MCTP1Q6DN14 999 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 KCTD1Q719H9 257 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 BRAPQ7Z569 592 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 FERMT3Q86UX7 667 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 LDHDQ86WU2 507 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 CCDC148Q8NFR7 591 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 GLIS2Q9BZE0 524 aaPredicted RBP14.25□□□□□ -0.13
DDB1-209ENST00000537877 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.25□□□□□ -0.13
DDB1-209ENST00000537877 ISY1Q9ULR0 285 aaKnown RBP14.25□□□□□ -0.13
DDB1-209ENST00000537877 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
DDB1-209ENST00000537877 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 DDX11L8A8MPP1 907 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 PLA2G6O60733 806 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 PTMSP20962 102 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 MCM4P33991 863 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 USP14P54578 494 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 OTUD7BQ6GQQ9 843 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 BTNL9Q6UXG8 535 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 CCDC84Q86UT8 332 aaPredicted RBP14.24□□□□□ -0.13
DDB1-209ENST00000537877 CCDC12Q8WUD4 166 aaPredicted RBP14.24□□□□□ -0.13
DDB1-209ENST00000537877 ZKSCAN4Q969J2 545 aaPredicted RBP14.24□□□□□ -0.13
DDB1-209ENST00000537877 MTMR8Q96EF0 704 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 PHF20Q9BVI0 1012 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 UBA5Q9GZZ9 404 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 RRAGCQ9HB90 399 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 BRMS1Q9HCU9 246 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 GJB4Q9NTQ9 266 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 CSADQ9Y600 493 aa14.24□□□□□ -0.13
DDB1-209ENST00000537877 USP17L10C9JJH3 530 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
DDB1-209ENST00000537877 CALML3P27482 149 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 STAT2P52630 851 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 ATL3Q6DD88 541 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 TTBK2Q6IQ55 1244 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.23□□□□□ -0.13
DDB1-209ENST00000537877 ARMC9Q7Z3E5 817 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 FAM160B2Q86V87 743 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 HOMER1Q86YM7 354 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 ADGRF4Q8IZF3 695 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 ZNF280CQ8ND82 737 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 PIGSQ96S52 555 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 CPVLQ9H3G5 476 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 JMJD4Q9H9V9 463 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 BARHL2Q9NY43 387 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 VPS54Q9P1Q0 977 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 FZD1Q9UP38 647 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 SNCAIPQ9Y6H5 919 aa14.23□□□□□ -0.13
DDB1-209ENST00000537877 BAZ2BQ9UIF8 2168 aaKnown RBP14.23□□□□□ -0.13
DDB1-209ENST00000537877 PNMA6FA0A0J9YX94 578 aa14.22□□□□□ -0.13
DDB1-209ENST00000537877 TMEM232C9JQI7 657 aa14.22□□□□□ -0.13
DDB1-209ENST00000537877 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
DDB1-209ENST00000537877 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
DDB1-209ENST00000537877 U2AF2P26368 475 aaKnown RBP eCLIP14.22□□□□□ -0.139e-8■■■■■ 32.2
DDB1-209ENST00000537877 SLC16A2P36021 539 aa14.22□□□□□ -0.13
DDB1-209ENST00000537877 KRT85P78386 507 aa14.22□□□□□ -0.13
DDB1-209ENST00000537877 IKQ13123 557 aaPredicted RBP14.22□□□□□ -0.13
DDB1-209ENST00000537877 GNL2Q13823 731 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms