RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 ZSCAN10Q96SZ4 725 aaPredicted RBP17.86■□□□□ 0.45
SRRM4-202ENST00000537597 NUP88Q99567 741 aaPredicted RBP17.86■□□□□ 0.45
SRRM4-202ENST00000537597 MTA3Q9BTC8 594 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 FBXO28Q9NVF7 368 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 PPP1R9AQ9ULJ8 1098 aa17.86■□□□□ 0.45
SRRM4-202ENST00000537597 ERVK-9P63128 1117 aa17.85■□□□□ 0.45
SRRM4-202ENST00000537597 ERVK-24P63145 666 aa17.85■□□□□ 0.45
SRRM4-202ENST00000537597 ATP2B2Q01814 1243 aa17.85■□□□□ 0.45
SRRM4-202ENST00000537597 PKN2Q16513 984 aaKnown RBP17.85■□□□□ 0.45
SRRM4-202ENST00000537597 CCDC178Q5BJE1 867 aa17.85■□□□□ 0.45
SRRM4-202ENST00000537597 SMCR8Q8TEV9 937 aaPredicted RBP17.85■□□□□ 0.45
SRRM4-202ENST00000537597 USP26Q9BXU7 913 aa17.85■□□□□ 0.45
SRRM4-202ENST00000537597 STX8Q9UNK0 236 aa17.85■□□□□ 0.45
SRRM4-202ENST00000537597 DOCK3Q8IZD9 2030 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 ATP2A1O14983 1001 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 HSPA4P34932 840 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 EXOSC10Q01780 885 aaKnown RBP17.84■□□□□ 0.45
SRRM4-202ENST00000537597 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 RASGRP2Q7LDG7 609 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 GPRC5AQ8NFJ5 357 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 USP6NLQ92738 828 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 ZKSCAN3Q9BRR0 538 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 MCOLN1Q9GZU1 580 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 PTPN22Q9Y2R2 807 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 MGAMO43451 1857 aa17.84■□□□□ 0.45
SRRM4-202ENST00000537597 CENPFP49454 3210 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 VWA5AO00534 786 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 IGHA2P01877 340 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 BMP3P12645 472 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 PSMC4P43686 418 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 TMEM132BQ14DG7 1078 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 MB21D1Q8N884 522 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 NCOA7Q8NI08 942 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 ATG4CQ96DT6 458 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 IL17RAQ96F46 866 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 PORCNQ9H237 461 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 EFCC1Q9HA90 598 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 SENP2Q9HC62 589 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 TOMM22Q9NS69 142 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 FEM1BQ9UK73 627 aa17.83■□□□□ 0.44
SRRM4-202ENST00000537597 ZNF214Q9UL59 606 aaPredicted RBP17.83■□□□□ 0.44
SRRM4-202ENST00000537597 PLXNB2O15031 1838 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 TNKSO95271 1327 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 FLOT1O75955 427 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 PDHBP11177 359 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 MCCP23508 829 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.82■□□□□ 0.44
SRRM4-202ENST00000537597 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 PRPF38AQ8NAV1 312 aaKnown RBP17.82■□□□□ 0.44
SRRM4-202ENST00000537597 DCAF4Q8WV16 495 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 SRRDQ9UH36 339 aa17.82■□□□□ 0.44
SRRM4-202ENST00000537597 PRMT2P55345 433 aa17.81■□□□□ 0.44
SRRM4-202ENST00000537597 ADCK5Q3MIX3 580 aa17.81■□□□□ 0.44
SRRM4-202ENST00000537597 FBXO46Q6PJ61 603 aaPredicted RBP17.81■□□□□ 0.44
SRRM4-202ENST00000537597 SHCBP1Q8NEM2 672 aa17.81■□□□□ 0.44
SRRM4-202ENST00000537597 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
SRRM4-202ENST00000537597 TANGO6Q9C0B7 1094 aa17.81■□□□□ 0.44
SRRM4-202ENST00000537597 SLC38A10Q9HBR0 1119 aa17.81■□□□□ 0.44
SRRM4-202ENST00000537597 TRIM17Q9Y577 477 aa17.81■□□□□ 0.44
SRRM4-202ENST00000537597 ZNF536O15090 1300 aa17.8■□□□□ 0.44
SRRM4-202ENST00000537597 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
SRRM4-202ENST00000537597 IRF5Q13568 498 aa17.8■□□□□ 0.44
SRRM4-202ENST00000537597 MORN1Q5T089 497 aa17.8■□□□□ 0.44
SRRM4-202ENST00000537597 MOV10L1Q9BXT6 1211 aaKnown RBP17.8■□□□□ 0.44
SRRM4-202ENST00000537597 SPATC1LQ9H0A9 340 aa17.8■□□□□ 0.44
SRRM4-202ENST00000537597 GABRQQ9UN88 632 aa17.8■□□□□ 0.44
SRRM4-202ENST00000537597 SNX14Q9Y5W7 946 aa17.8■□□□□ 0.44
SRRM4-202ENST00000537597 WDR19Q8NEZ3 1342 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 TMEM232C9JQI7 657 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 REC8O95072 547 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 FDX1P10109 184 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 SLC1A4P43007 532 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 FCGRTP55899 365 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 TROAPQ12815 778 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 TRDNQ13061 729 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 ARHGEF6Q15052 776 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 TTBK2Q6IQ55 1244 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 RIOX2Q8IUF8 465 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 FBXL16Q8N461 479 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 LY9Q9HBG7 655 aa17.79■□□□□ 0.44
SRRM4-202ENST00000537597 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
SRRM4-202ENST00000537597 COL11A1P12107 1806 aaPredicted RBP17.78■□□□□ 0.44
SRRM4-202ENST00000537597 MAPK4P31152 587 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 LIFRP42702 1097 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 KIF22Q14807 665 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 SLC35G1Q2M3R5 365 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 RNF20Q5VTR2 975 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 KCTD1Q719H9 257 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 CHST3Q7LGC8 479 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 FAM160B2Q86V87 743 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 CHURC1Q8WUH1 139 aa17.78■□□□□ 0.44
SRRM4-202ENST00000537597 PALM3A6NDB9 673 aaPredicted RBP17.77■□□□□ 0.44
SRRM4-202ENST00000537597 SH2B2O14492 632 aaPredicted RBP17.77■□□□□ 0.44
SRRM4-202ENST00000537597 SEC24BO95487 1268 aa17.77■□□□□ 0.44
SRRM4-202ENST00000537597 MCM5P33992 734 aa17.77■□□□□ 0.44
SRRM4-202ENST00000537597 OAZ1P54368 228 aa17.77■□□□□ 0.44
SRRM4-202ENST00000537597 PRKCZQ05513 592 aa17.77■□□□□ 0.44
SRRM4-202ENST00000537597 C8orf34Q49A92 452 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms