RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RAD21O60216 631 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 FGAP02671 866 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 TSPY3P0CV98 308 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 TSPY8P0CW00 308 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 FAM83BQ5T0W9 1011 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 MB21D1Q8N884 522 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 NKX2-3Q8TAU0 364 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 U2AF1L4Q8WU68 220 aaKnown RBP21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 MKL1Q969V6 931 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 SPATC1LQ9H0A9 340 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 ADAMTS5Q9UNA0 930 aa21.22■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CEP290O15078 2479 aa21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 F5H6K3 240 aa21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 PTPREP23469 700 aa21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 RGS2P41220 211 aa21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 TFAP4Q01664 338 aa21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 KLRC3Q07444 240 aa21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 WDR78Q5VTH9 848 aa21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 NUP88Q99567 741 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 CWC22Q9HCG8 908 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1A-209ENST00000536717 SGPL1O95470 568 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 TTLL1O95922 423 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 NDUFB10O96000 172 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 MAP2K5Q13163 448 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 GRB14Q14449 540 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 CCL14Q16627 93 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 SAMD1Q6SPF0 538 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 APBA2Q99767 749 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 PLXNA1Q9UIW2 1896 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 ZMYM6O95789 1325 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 FRMPD3Q5JV73 1810 aa21.2■□□□□ 0.98
TNFRSF1A-209ENST00000536717 SLC15A5A6NIM6 579 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 FGRP09769 529 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 MAP3K21Q5TCX8 1036 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 SHCBP1Q8NEM2 672 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 DEFB118Q96PH6 123 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 PPP1R9AQ9ULJ8 1098 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 ERCC3P19447 782 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 TMEM132BQ14DG7 1078 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 CWC27Q6UX04 472 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 LRRC47Q8N1G4 583 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 SYNPO2Q9UMS6 1093 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 IVNS1ABPQ9Y6Y0 642 aa21.19■□□□□ 0.98
TNFRSF1A-209ENST00000536717 RPTORQ8N122 1335 aa21.18■□□□□ 0.98
TNFRSF1A-209ENST00000536717 GSPT1P15170 499 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-209ENST00000536717 PLS1Q14651 629 aa21.18■□□□□ 0.98
TNFRSF1A-209ENST00000536717 UBE2Q1Q7Z7E8 422 aa21.18■□□□□ 0.98
TNFRSF1A-209ENST00000536717 TRMT44Q8IYL2 757 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-209ENST00000536717 REPS2Q8NFH8 660 aa21.18■□□□□ 0.98
TNFRSF1A-209ENST00000536717 IL17RBQ9NRM6 502 aa21.18■□□□□ 0.98
TNFRSF1A-209ENST00000536717 TSPY2A6NKD2 308 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 VWA5AO00534 786 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 ORC4O43929 436 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 HOXC6P09630 235 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 PRKAR2AP13861 404 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 GMCL1P1Q8NEA9 526 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 CRISPLD2Q9H0B8 497 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 HMX1Q9NP08 348 aaPredicted RBP21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 FLRT1Q9NZU1 646 aa21.17■□□□□ 0.98
TNFRSF1A-209ENST00000536717 NMT2O60551 498 aa21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 MFAP1P55081 439 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 TTC22Q5TAA0 569 aa21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 PRPF38BQ5VTL8 546 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 NPLOC4Q8TAT6 608 aa21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 SLF1Q9BQI6 1058 aa21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 ZNF214Q9UL59 606 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 ALPK3Q96L96 1907 aa21.16■□□□□ 0.98
TNFRSF1A-209ENST00000536717 HIP1O00291 1037 aa21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 STRNO43815 780 aa21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 RANBP6O60518 1105 aaKnown RBP21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 HAND2P61296 217 aa21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 CACNB2Q08289 660 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 NCAPG2Q86XI2 1143 aa21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 MROH8Q9H579 483 aa21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 SMCHD1A6NHR9 2005 aa21.15■□□□□ 0.98
TNFRSF1A-209ENST00000536717 ADORA2AP29274 412 aa21.14■□□□□ 0.98
TNFRSF1A-209ENST00000536717 SKAP1Q86WV1 359 aa21.14■□□□□ 0.98
TNFRSF1A-209ENST00000536717 NOVP48745 357 aa21.14■□□□□ 0.97
TNFRSF1A-209ENST00000536717 SLFN13Q68D06 897 aa21.14■□□□□ 0.97
TNFRSF1A-209ENST00000536717 RIOX2Q8IUF8 465 aa21.14■□□□□ 0.97
TNFRSF1A-209ENST00000536717 PRPF38AQ8NAV1 312 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1A-209ENST00000536717 IL25Q9H293 177 aa21.14■□□□□ 0.97
TNFRSF1A-209ENST00000536717 STX8Q9UNK0 236 aa21.14■□□□□ 0.97
TNFRSF1A-209ENST00000536717 COBLO75128 1261 aa21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 FARP2O94887 1054 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 SLC25A27O95847 323 aa21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 IGHA2P01877 340 aa21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 TFRCP02786 760 aaKnown RBP21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 STAT3P40763 770 aa21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 TBC1D10CQ8IV04 446 aa21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 TOMM22Q9NS69 142 aa21.13■□□□□ 0.97
TNFRSF1A-209ENST00000536717 CAPN2P17655 700 aa21.12■□□□□ 0.97
TNFRSF1A-209ENST00000536717 CCND3P30281 292 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1A-209ENST00000536717 RRP12Q5JTH9 1297 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-209ENST00000536717 PPP4R3BQ5MIZ7 849 aa21.12■□□□□ 0.97
TNFRSF1A-209ENST00000536717 AKNAD1Q5T1N1 836 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms