RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 LRRIQ3A6PVS8 624 aaPredicted RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 USP17L12C9JPN9 530 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 USP17L21D6R901 530 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 GUCY1A2P33402 732 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 TTC19Q6DKK2 380 aaPredicted RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 CEP120Q8N960 986 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 HNRNPLLQ8WVV9 542 aaKnown RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 RIN2Q8WYP3 895 aaPredicted RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 N4BP2L2Q92802 583 aaPredicted RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 BAG1Q99933 345 aaPredicted RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 QTRT2Q9H974 415 aaKnown RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 CUTAO60888 179 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 SSRP1Q08945 709 aaKnown RBP15.76■□□□□ 0.11
LIG1-203ENST00000536218 TRIM29Q14134 588 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 KIFC2Q96AC6 838 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 ANKRD2Q9GZV1 360 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 CD248Q9HCU0 757 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 KIAA1468Q9P260 1216 aa15.76■□□□□ 0.11
LIG1-203ENST00000536218 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 LIFRP42702 1097 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 NTRK3Q16288 839 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 SGMS1Q86VZ5 419 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 LINC00301Q8NCQ3 95 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
LIG1-203ENST00000536218 TRIM37O94972 964 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 ADKP55263 362 aaKnown RBP15.75■□□□□ 0.11
LIG1-203ENST00000536218 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
LIG1-203ENST00000536218 RTN1Q16799 776 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 KIF4BQ2VIQ3 1234 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 NAIF1Q69YI7 327 aaPredicted RBP15.75■□□□□ 0.11
LIG1-203ENST00000536218 ENGASEQ8NFI3 743 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 NSUN4Q96CB9 384 aaKnown RBP15.75■□□□□ 0.11
LIG1-203ENST00000536218 KCNJ14Q9UNX9 436 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 SPTLC2O15270 562 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 PAX7P23759 505 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 NF2P35240 595 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 CENPHQ9H3R5 247 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 RTEL1Q9NZ71 1219 aa15.75■□□□□ 0.11
LIG1-203ENST00000536218 COL5A3P25940 1745 aaPredicted RBP15.74■□□□□ 0.11
LIG1-203ENST00000536218 POTEB2H3BUK9 544 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 MYO1FO00160 1098 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
LIG1-203ENST00000536218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.74■□□□□ 0.11
LIG1-203ENST00000536218 EHD4Q9H223 541 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 TRPC5Q9UL62 973 aaPredicted RBP15.74■□□□□ 0.11
LIG1-203ENST00000536218 SAMM50Q9Y512 469 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 TNKSO95271 1327 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 FRMD3A2A2Y4 597 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 GOLGA6L9A6NEM1 432 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 IRF6O14896 467 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 ELF1P32519 619 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 NDUFA8P51970 172 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 MAP9Q49MG5 647 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 DZIP1Q86YF9 867 aaKnown RBP15.74■□□□□ 0.11
LIG1-203ENST00000536218 MRPS27Q92552 414 aaKnown RBP15.74■□□□□ 0.11
LIG1-203ENST00000536218 ESR2Q92731 530 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 RREB1Q92766 1687 aa15.74■□□□□ 0.11
LIG1-203ENST00000536218 CYP2D6P10635 497 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 ANO1Q5XXA6 986 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 IGSF22Q8N9C0 903 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 CTCFLQ8NI51 663 aaPredicted RBP15.73■□□□□ 0.11
LIG1-203ENST00000536218 MIEF2Q96C03 454 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 BTAF1O14981 1849 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 NEDD9Q14511 834 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 FAM47AQ5JRC9 791 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 ATL3Q6DD88 541 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 BRAPQ7Z569 592 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 ZNF654Q8IZM8 581 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 CALRP27797 417 aaKnown RBP15.73■□□□□ 0.11
LIG1-203ENST00000536218 AKAP17AQ02040 695 aaKnown RBP15.73■□□□□ 0.11
LIG1-203ENST00000536218 NCAPHQ15003 741 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 CEP112Q8N8E3 955 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 BCAS4Q8TDM0 211 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 RPGRQ92834 1020 aaKnown RBP15.73■□□□□ 0.11
LIG1-203ENST00000536218 CABS1Q96KC9 395 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 GBP3Q9H0R5 595 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 VEZTQ9HBM0 779 aa15.73■□□□□ 0.11
LIG1-203ENST00000536218 CBFA2T2O43439 604 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 USP5P45974 858 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 PRR5LQ6MZQ0 368 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 FANCLQ9NW38 375 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 BTBD18B2RXH4 712 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 NMT2O60551 498 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 SARNPP82979 210 aaKnown RBP15.72■□□□□ 0.11
LIG1-203ENST00000536218 ADALQ6DHV7 355 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 FCHSD1Q86WN1 690 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 TRIM22Q8IYM9 498 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 FANCBQ8NB91 859 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 CERKQ8TCT0 537 aa15.72■□□□□ 0.11
LIG1-203ENST00000536218 GOLGB1Q14789 3259 aaKnown RBP15.72■□□□□ 0.11
LIG1-203ENST00000536218 MTF1Q14872 753 aa15.71■□□□□ 0.11
LIG1-203ENST00000536218 DIXDC1Q155Q3 683 aa15.71■□□□□ 0.11
LIG1-203ENST00000536218 KAT14Q9H8E8 782 aa15.71■□□□□ 0.11
LIG1-203ENST00000536218 RAB21Q9UL25 225 aa15.71■□□□□ 0.11
LIG1-203ENST00000536218 GRAPQ13588 217 aa15.71■□□□□ 0.11
LIG1-203ENST00000536218 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
LIG1-203ENST00000536218 FMR1NBQ8N0W7 255 aaPredicted RBP15.71■□□□□ 0.11
LIG1-203ENST00000536218 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
LIG1-203ENST00000536218 KCNG4Q8TDN1 519 aa15.71■□□□□ 0.11
LIG1-203ENST00000536218 MRPL44Q9H9J2 332 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms