RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 SHISA4Q96DD7 197 aa20.83■□□□□ 0.92
CACNB3-202ENST00000536187 VCPKMTQ9H867 229 aa20.83■□□□□ 0.92
CACNB3-202ENST00000536187 EMILIN3Q9NT22 766 aa20.83■□□□□ 0.92
CACNB3-202ENST00000536187 AFG3L2Q9Y4W6 797 aa20.83■□□□□ 0.92
CACNB3-202ENST00000536187 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.83■□□□□ 0.92
CACNB3-202ENST00000536187 KLRF2D3W0D1 207 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 IFNAR1P17181 557 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 CCDC96Q2M329 555 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 ZNF280CQ8ND82 737 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 MAP3K14Q99558 947 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 FEZ1Q99689 392 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 SLC26A6Q9BXS9 759 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 GBA2Q9HCG7 927 aaPredicted RBP20.82■□□□□ 0.92
CACNB3-202ENST00000536187 CSADQ9Y600 493 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 MYH6P13533 1939 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 PASKQ96RG2 1323 aa20.82■□□□□ 0.92
CACNB3-202ENST00000536187 FAM83BQ5T0W9 1011 aa20.81■□□□□ 0.92
CACNB3-202ENST00000536187 ARMC9Q7Z3E5 817 aa20.81■□□□□ 0.92
CACNB3-202ENST00000536187 OTUD5Q96G74 571 aa20.81■□□□□ 0.92
CACNB3-202ENST00000536187 LLPHQ9BRT6 129 aaKnown RBP20.81■□□□□ 0.92
CACNB3-202ENST00000536187 WDR18Q9BV38 432 aa20.81■□□□□ 0.92
CACNB3-202ENST00000536187 GINM1Q9NU53 330 aa20.81■□□□□ 0.92
CACNB3-202ENST00000536187 RBM28Q9NW13 759 aaKnown RBP20.81■□□□□ 0.92
CACNB3-202ENST00000536187 SLC1A4P43007 532 aa20.81■□□□□ 0.92
CACNB3-202ENST00000536187 KIAA1683Q9H0B3 1180 aa20.81■□□□□ 0.92
CACNB3-202ENST00000536187 IRF6O14896 467 aa20.8■□□□□ 0.92
CACNB3-202ENST00000536187 HMGCS2P54868 508 aa20.8■□□□□ 0.92
CACNB3-202ENST00000536187 BACE1P56817 501 aa20.8■□□□□ 0.92
CACNB3-202ENST00000536187 PKN1Q16512 942 aa20.8■□□□□ 0.92
CACNB3-202ENST00000536187 PPP4R3BQ5MIZ7 849 aa20.8■□□□□ 0.92
CACNB3-202ENST00000536187 GMCL1Q96IK5 515 aa20.8■□□□□ 0.92
CACNB3-202ENST00000536187 ORC3Q9UBD5 711 aaPredicted RBP20.8■□□□□ 0.92
CACNB3-202ENST00000536187 ISY1Q9ULR0 285 aaKnown RBP20.8■□□□□ 0.92
CACNB3-202ENST00000536187 USP17L10C9JJH3 530 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 DHX16O60231 1041 aaKnown RBP20.79■□□□□ 0.92
CACNB3-202ENST00000536187 FMNL1O95466 1100 aaPredicted RBP20.79■□□□□ 0.92
CACNB3-202ENST00000536187 KIF5BP33176 963 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 OTUD7BQ6GQQ9 843 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 DCAF4Q8WV16 495 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 OPTNQ96CV9 577 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 FBXO28Q9NVF7 368 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 V9GY48 417 aaPredicted RBP20.79■□□□□ 0.92
CACNB3-202ENST00000536187 CCDC196A0A1B0GTZ2 297 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 SPDYE5A6NIY4 337 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 SNAP25P60880 206 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 ASPRV1Q53RT3 343 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 VAT1LQ9HCJ6 419 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 GOPCQ9HD26 462 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 ZDHHC9Q9Y397 364 aa20.79■□□□□ 0.92
CACNB3-202ENST00000536187 BMP3P12645 472 aa20.78■□□□□ 0.92
CACNB3-202ENST00000536187 TAL1P17542 331 aaPredicted RBP20.78■□□□□ 0.92
CACNB3-202ENST00000536187 VCAM1P19320 739 aa20.78■□□□□ 0.92
CACNB3-202ENST00000536187 PARP14Q460N5 1801 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 TMEM232C9JQI7 657 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 SYT1P21579 422 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 MKRN3Q13064 507 aaKnown RBP20.77■□□□□ 0.92
CACNB3-202ENST00000536187 FOXD4L5Q5VV16 416 aaPredicted RBP20.77■□□□□ 0.92
CACNB3-202ENST00000536187 FOXD4L4Q8WXT5 416 aaPredicted RBP20.77■□□□□ 0.92
CACNB3-202ENST00000536187 SYNPO2Q9UMS6 1093 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 GUCY1B3Q02153 619 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 SSRP1Q08945 709 aaKnown RBP20.77■□□□□ 0.92
CACNB3-202ENST00000536187 PPP2R5BQ15173 497 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 ERO1BQ86YB8 467 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 ADGRF4Q8IZF3 695 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 PIGSQ96S52 555 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 JMJD4Q9H9V9 463 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 AS3MTQ9HBK9 375 aa20.77■□□□□ 0.92
CACNB3-202ENST00000536187 RLFQ13129 1914 aa20.76■□□□□ 0.91
CACNB3-202ENST00000536187 HOMER1Q86YM7 354 aa20.76■□□□□ 0.91
CACNB3-202ENST00000536187 C2orf69Q8N8R5 385 aa20.76■□□□□ 0.91
CACNB3-202ENST00000536187 RNF26Q9BY78 433 aaPredicted RBP20.76■□□□□ 0.91
CACNB3-202ENST00000536187 RIOX1Q9H6W3 641 aa20.76■□□□□ 0.91
CACNB3-202ENST00000536187 SH2D4AQ9H788 454 aa20.76■□□□□ 0.91
CACNB3-202ENST00000536187 STK36Q9NRP7 1315 aa20.76■□□□□ 0.91
CACNB3-202ENST00000536187 LOC285556D6RIA3 1793 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 CDKL5O76039 1030 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 HMGN5P82970 282 aaKnown RBP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 PPATQ06203 517 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 TREML2Q5T2D2 321 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 SMC1BQ8NDV3 1235 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 SPZ1Q9BXG8 430 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 SMCHD1A6NHR9 2005 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 ADAMTS3O15072 1205 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 PRPF3O43395 683 aaKnown RBP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 PPP1R11O60927 126 aaPredicted RBP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 TYW1BQ6NUM6 668 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 CPLX2Q6PUV4 134 aaKnown RBP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 SAMD1Q6SPF0 538 aaPredicted RBP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 CHAMP1Q96JM3 812 aa20.75■□□□□ 0.91
CACNB3-202ENST00000536187 CWC22Q9HCG8 908 aaKnown RBP20.75■□□□□ 0.91
CACNB3-202ENST00000536187 TOMM70O94826 608 aa20.74■□□□□ 0.91
CACNB3-202ENST00000536187 HUNKP57058 714 aa20.74■□□□□ 0.91
CACNB3-202ENST00000536187 FKBP1BP68106 108 aa20.74■□□□□ 0.91
CACNB3-202ENST00000536187 MOGSQ13724 837 aa20.74■□□□□ 0.91
CACNB3-202ENST00000536187 FAM184AQ8NB25 1140 aa20.74■□□□□ 0.91
CACNB3-202ENST00000536187 SLC10A4Q96EP9 437 aa20.74■□□□□ 0.91
CACNB3-202ENST00000536187 WNK4Q96J92 1243 aa20.74■□□□□ 0.91
CACNB3-202ENST00000536187 ALG1Q9BT22 464 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms