RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 NAPBQ9H115 298 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 DCTPP1Q9H773 170 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 CEP290O15078 2479 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 BRCA2P51587 3418 aa15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 MKI67P46013 3256 aaKnown RBP15.79■□□□□ 0.12
CLSTN3-205ENST00000535452 PFASO15067 1338 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 GPAA1O43292 621 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 TSPY3P0CV98 308 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 TSPY8P0CW00 308 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 ATN1P54259 1190 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 IKQ13123 557 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 FAM83BQ5T0W9 1011 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 RNF180Q86T96 592 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 RIOX2Q8IUF8 465 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 GDF15Q99988 308 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 FLRT1Q9NZU1 646 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 PPP1R9AQ9ULJ8 1098 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 ATP11BQ9Y2G3 1177 aa15.78■□□□□ 0.12
CLSTN3-205ENST00000535452 COL6A1P12109 1028 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 CYBAP13498 195 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 C20orf194Q5TEA3 1177 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 GPR153Q6NV75 609 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 CLEC10AQ8IUN9 316 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 PRPF38AQ8NAV1 312 aaKnown RBP15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 MAML3Q96JK9 1138 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 TEX13BQ9BXU2 312 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 PRO3102Q9H379 93 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 SPC25Q9HBM1 224 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 PRDM5Q9NQX1 630 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 NYAP2Q9P242 653 aa15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 DIS3Q9Y2L1 958 aaKnown RBP15.77■□□□□ 0.12
CLSTN3-205ENST00000535452 PLXNB2O15031 1838 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 PATL2C9JE40 543 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 F5H6K3 240 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 VWA5AO00534 786 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 TTLL1O95922 423 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 MDM2Q00987 491 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 KLRC3Q07444 240 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 TMEM132BQ14DG7 1078 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 LRRC26Q2I0M4 334 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 SLFNL1Q499Z3 407 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 SNRNP48Q6IEG0 339 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 CLIP2Q9UDT6 1046 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 FBXO40Q9UH90 709 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 SYNPO2Q9UMS6 1093 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 TRIOBPQ9H2D6 2365 aa15.76■□□□□ 0.11
CLSTN3-205ENST00000535452 FDX1P10109 184 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 AKR1A1P14550 325 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 RTP1P59025 263 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 EVX2Q03828 476 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 LRIT3Q3SXY7 679 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 ANKRD35Q8N283 1001 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 KIFC2Q96AC6 838 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 TINF2Q9BSI4 451 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 XPNPEP3Q9NQH7 507 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 FEM1BQ9UK73 627 aa15.75■□□□□ 0.11
CLSTN3-205ENST00000535452 GSG1L2A8MUP6 293 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 MX1P20591 662 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 ANO1Q5XXA6 986 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 IFNL3Q8IZI9 196 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 CPXCR1Q8N123 301 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 SLC17A8Q8NDX2 589 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 FBXO28Q9NVF7 368 aa15.74■□□□□ 0.11
CLSTN3-205ENST00000535452 MYH7P12883 1935 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 TSPY2A6NKD2 308 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 COBLO75128 1261 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 NDUFB10O96000 172 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 PGK2P07205 417 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 RASA1P20936 1047 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 TSHZ3Q63HK5 1081 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 DEFB123Q8N688 67 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 CHURC1Q8WUH1 139 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 NUP133Q8WUM0 1156 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 OSBP2Q969R2 916 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 ZNF236Q9UL36 1845 aa15.73■□□□□ 0.11
CLSTN3-205ENST00000535452 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 PRDM1O75626 825 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 BMP3P12645 472 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 ADCYAP1R1P41586 468 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 KIAA1755Q5JYT7 1200 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 SLC39A5Q6ZMH5 540 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 SIAH1Q8IUQ4 282 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 LRCH3Q96II8 777 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 TOMM22Q9NS69 142 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 ZHX1Q9UKY1 873 aaPredicted RBP15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 FAM184BQ9ULE4 1060 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 ADAMTS5Q9UNA0 930 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 STX8Q9UNK0 236 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 ROBO3Q96MS0 1386 aa15.72■□□□□ 0.11
CLSTN3-205ENST00000535452 SLC1A4P43007 532 aa15.71■□□□□ 0.11
CLSTN3-205ENST00000535452 STAT2P52630 851 aa15.71■□□□□ 0.11
CLSTN3-205ENST00000535452 OAZ1P54368 228 aa15.71■□□□□ 0.11
CLSTN3-205ENST00000535452 PRAMEF19Q5SWL8 479 aa15.71■□□□□ 0.11
CLSTN3-205ENST00000535452 ANKRD45Q5TZF3 282 aa15.71■□□□□ 0.11
CLSTN3-205ENST00000535452 SLFN13Q68D06 897 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms