RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 GRM4Q14833 912 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 SH3D19Q5HYK7 790 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
SCARB1-204ENST00000535005 SAPCD2Q86UD0 394 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 FANCBQ8NB91 859 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 CHMP4CQ96CF2 233 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 KCNH4Q9UQ05 1017 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 TLL2Q9Y6L7 1015 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 PHIPQ8WWQ0 1821 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 TMEM88BA6NKF7 163 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 NDUFB10O96000 172 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 PDHBP11177 359 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 SLFN13Q68D06 897 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 USP17L2Q6R6M4 530 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 DCAF4Q8WV16 495 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 CNKSR2Q8WXI2 1034 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 LPAR1Q92633 364 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 HHIPL1Q96JK4 782 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 C12orf42Q96LP6 360 aa14.29□□□□□ -0.12
SCARB1-204ENST00000535005 MYH4Q9Y623 1939 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 KIF5BP33176 963 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 METAP2P50579 478 aaKnown RBP eCLIP14.28□□□□□ -0.12
SCARB1-204ENST00000535005 CUL4AQ13619 759 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 MICU3Q86XE3 530 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 OPTNQ96CV9 577 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 FEZ1Q99689 392 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 MYL10Q9BUA6 226 aa14.28□□□□□ -0.12
SCARB1-204ENST00000535005 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-204ENST00000535005 NAP1L2Q9ULW6 460 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-204ENST00000535005 CCDC196A0A1B0GTZ2 297 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 PALM3A6NDB9 673 aaPredicted RBP14.27□□□□□ -0.12
SCARB1-204ENST00000535005 IRF6O14896 467 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 ZNF500O60304 480 aaPredicted RBP14.27□□□□□ -0.12
SCARB1-204ENST00000535005 GNAQP50148 359 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 SCRN1Q12765 414 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 MTMR2Q13614 643 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 RTN1Q16799 776 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 CSPP1Q1MSJ5 1256 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 ASPRV1Q53RT3 343 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 CTCFLQ8NI51 663 aaPredicted RBP14.27□□□□□ -0.12
SCARB1-204ENST00000535005 OTUD5Q96G74 571 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 WNK4Q96J92 1243 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.12
SCARB1-204ENST00000535005 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.12
SCARB1-204ENST00000535005 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.12
SCARB1-204ENST00000535005 TRIM75PA6NK02 468 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 DHX16O60231 1041 aaKnown RBP14.27□□□□□ -0.13
SCARB1-204ENST00000535005 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
SCARB1-204ENST00000535005 RXRAP19793 462 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 GJA5P36382 358 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 ZNF543Q08ER8 600 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 ST3GAL1Q11201 340 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 STK3Q13188 491 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 KIAA1755Q5JYT7 1200 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 GPATCH4Q5T3I0 446 aaKnown RBP14.27□□□□□ -0.13
SCARB1-204ENST00000535005 NECAB1Q8N987 351 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 MAD2L2Q9UI95 211 aa14.27□□□□□ -0.13
SCARB1-204ENST00000535005 A0A0G2JLL6 359 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-204ENST00000535005 WDR46O15213 610 aaKnown RBP14.26□□□□□ -0.13
SCARB1-204ENST00000535005 ZBTB48P10074 688 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-204ENST00000535005 SMARCA1P28370 1054 aa14.26□□□□□ -0.13
SCARB1-204ENST00000535005 CDC27P30260 824 aa14.26□□□□□ -0.13
SCARB1-204ENST00000535005 CCT2P78371 535 aaKnown RBP14.26□□□□□ -0.13
SCARB1-204ENST00000535005 SPRYD7Q5W111 196 aa14.26□□□□□ -0.13
SCARB1-204ENST00000535005 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
SCARB1-204ENST00000535005 PRRT2Q7Z6L0 340 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-204ENST00000535005 RAB11FIP4Q86YS3 637 aa14.26□□□□□ -0.13
SCARB1-204ENST00000535005 LZTS2Q9BRK4 669 aa14.26□□□□□ -0.13
SCARB1-204ENST00000535005 PLA2G6O60733 806 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 BAG4O95429 457 aaKnown RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 BMP3P12645 472 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 ADD1P35611 737 aaKnown RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 SLC1A4P43007 532 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 APLP1P51693 650 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 NTRK3Q16288 839 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 INTS4Q96HW7 963 aaKnown RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 LLPHQ9BRT6 129 aaKnown RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 NCOA5Q9HCD5 579 aaKnown RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 TMOD4Q9NZQ9 345 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 IFNAR1P17181 557 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 HMGCS2P54868 508 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 SNAPC2Q13487 334 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 ZYXQ15942 572 aaKnown RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 CPLX2Q6PUV4 134 aaKnown RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 BTNL9Q6UXG8 535 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 RASGRP2Q7LDG7 609 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 RASAL3Q86YV0 1011 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 CCDC83Q8IWF9 413 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 CCDC144CPQ8IYA2 1237 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 STAG2Q8N3U4 1231 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
SCARB1-204ENST00000535005 PDLIM2Q96JY6 352 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 MTMR7Q9Y216 660 aa14.25□□□□□ -0.13
SCARB1-204ENST00000535005 DDX49Q9Y6V7 483 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms