RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TRIM47Q96LD4 638 aa16.51■□□□□ 0.23
VPS11-205ENST00000534551 ZSCAN10Q96SZ4 725 aaPredicted RBP16.51■□□□□ 0.23
VPS11-205ENST00000534551 BTBD7Q9P203 1132 aa16.51■□□□□ 0.23
VPS11-205ENST00000534551 RBPJLQ9UBG7 517 aa16.51■□□□□ 0.23
VPS11-205ENST00000534551 TRIM17Q9Y577 477 aa16.51■□□□□ 0.23
VPS11-205ENST00000534551 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
VPS11-205ENST00000534551 TAL1P17542 331 aaPredicted RBP16.5■□□□□ 0.23
VPS11-205ENST00000534551 GCLCP48506 637 aaPredicted RBP16.5■□□□□ 0.23
VPS11-205ENST00000534551 SEC23AQ15436 765 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 ADCK5Q3MIX3 580 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 IQCA1Q86XH1 822 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 UBAC1Q9BSL1 405 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 PORCNQ9H237 461 aa16.5■□□□□ 0.23
VPS11-205ENST00000534551 ZNFX1Q9P2E3 1918 aaKnown RBP16.5■□□□□ 0.23
VPS11-205ENST00000534551 PSMC4P43686 418 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 ERVK-9P63128 1117 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 ERVK-24P63145 666 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 TRDNQ13061 729 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 Q3C1V9 767 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 CTU1Q7Z7A3 348 aaKnown RBP16.49■□□□□ 0.23
VPS11-205ENST00000534551 MORF4L1Q9UBU8 362 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 PLXNA1Q9UIW2 1896 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
VPS11-205ENST00000534551 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
VPS11-205ENST00000534551 ZNF236Q9UL36 1845 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 REC8O95072 547 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 PDHBP11177 359 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 BMP3P12645 472 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 CPA1P15085 419 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 DSG3P32926 999 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 HSPA4P34932 840 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 SLC1A4P43007 532 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 SNAP25P60880 206 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 GMCL1Q96IK5 515 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 MCOLN1Q9GZU1 580 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 CPVLQ9H3G5 476 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 LCTP09848 1927 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 BAZ2BQ9UIF8 2168 aaKnown RBP16.48■□□□□ 0.23
VPS11-205ENST00000534551 BRCA2P51587 3418 aa16.48■□□□□ 0.23
VPS11-205ENST00000534551 PRC1O43663 620 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 SEC24BO95487 1268 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 SLC16A2P36021 539 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 COG2Q14746 738 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 PNMA1Q8ND90 353 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 SLF1Q9BQI6 1058 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 SNX14Q9Y5W7 946 aa16.47■□□□□ 0.23
VPS11-205ENST00000534551 TMEM232C9JQI7 657 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 IFIT3O14879 490 aaKnown RBP16.46■□□□□ 0.23
VPS11-205ENST00000534551 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
VPS11-205ENST00000534551 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 PRKCZQ05513 592 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 TMEM132BQ14DG7 1078 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 C8orf34Q49A92 452 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 PPP4R3BQ5MIZ7 849 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 IFIT1BQ5T764 474 aaKnown RBP16.46■□□□□ 0.23
VPS11-205ENST00000534551 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 DGKHQ86XP1 1220 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 DCAF4Q8WV16 495 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 KAT14Q9H8E8 782 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
VPS11-205ENST00000534551 MYPNQ86TC9 1320 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 VWA5AO00534 786 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 TNPO2O14787 897 aaKnown RBP16.45■□□□□ 0.22
VPS11-205ENST00000534551 FCGRTP55899 365 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
VPS11-205ENST00000534551 PLS1Q14651 629 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 KIF22Q14807 665 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 TMEM67Q5HYA8 995 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 TNS4Q8IZW8 715 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 JAKMIP1Q96N16 626 aaKnown RBP16.45■□□□□ 0.22
VPS11-205ENST00000534551 TTC14Q96N46 770 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 MYL10Q9BUA6 226 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 MOV10L1Q9BXT6 1211 aaKnown RBP16.45■□□□□ 0.22
VPS11-205ENST00000534551 USP26Q9BXU7 913 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 LY9Q9HBG7 655 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 ADAMTS5Q9UNA0 930 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 PTCH2Q9Y6C5 1203 aa16.45■□□□□ 0.22
VPS11-205ENST00000534551 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
VPS11-205ENST00000534551 SNHG28P0DPA3 235 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 STAT2P52630 851 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 WTAPQ15007 396 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 WDR78Q5VTH9 848 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms