RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SNX14Q9Y5W7 946 aa28.39■■■□□ 2.14
SIPA1-210ENST00000534406 MYPNQ86TC9 1320 aa28.39■■■□□ 2.13
SIPA1-210ENST00000534406 SPDYE16A6NNV3 312 aaPredicted RBP28.38■■■□□ 2.13
SIPA1-210ENST00000534406 PRC1O43663 620 aa28.38■■■□□ 2.13
SIPA1-210ENST00000534406 BMP3P12645 472 aa28.38■■■□□ 2.13
SIPA1-210ENST00000534406 SLC1A4P43007 532 aa28.38■■■□□ 2.13
SIPA1-210ENST00000534406 SP3Q02447 781 aa28.38■■■□□ 2.13
SIPA1-210ENST00000534406 ANKRD13CQ8N6S4 541 aa28.38■■■□□ 2.13
SIPA1-210ENST00000534406 PNMA1Q8ND90 353 aa28.38■■■□□ 2.13
SIPA1-210ENST00000534406 DCAF4Q8WV16 495 aa28.38■■■□□ 2.13
SIPA1-210ENST00000534406 COG2Q14746 738 aa28.37■■■□□ 2.13
SIPA1-210ENST00000534406 FAM110CQ1W6H9 321 aa28.37■■■□□ 2.13
SIPA1-210ENST00000534406 CCDC96Q2M329 555 aa28.37■■■□□ 2.13
SIPA1-210ENST00000534406 ADCK5Q3MIX3 580 aa28.37■■■□□ 2.13
SIPA1-210ENST00000534406 TMEM67Q5HYA8 995 aa28.37■■■□□ 2.13
SIPA1-210ENST00000534406 LBX2Q6XYB7 198 aa28.37■■■□□ 2.13
SIPA1-210ENST00000534406 MTA3Q9BTC8 594 aa28.37■■■□□ 2.13
SIPA1-210ENST00000534406 WTAPQ15007 396 aa28.36■■■□□ 2.13
SIPA1-210ENST00000534406 RASGRP2Q7LDG7 609 aa28.36■■■□□ 2.13
SIPA1-210ENST00000534406 CHMP4CQ96CF2 233 aa28.36■■■□□ 2.13
SIPA1-210ENST00000534406 JAKMIP1Q96N16 626 aaKnown RBP28.36■■■□□ 2.13
SIPA1-210ENST00000534406 FBXO28Q9NVF7 368 aa28.36■■■□□ 2.13
SIPA1-210ENST00000534406 HOXC10Q9NYD6 342 aa28.36■■■□□ 2.13
SIPA1-210ENST00000534406 HMGB1P09429 215 aaKnown RBP28.35■■■□□ 2.13
SIPA1-210ENST00000534406 SAMD1Q6SPF0 538 aaPredicted RBP28.35■■■□□ 2.13
SIPA1-210ENST00000534406 ERO1AQ96HE7 468 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 TMEM87BQ96K49 555 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 SLF1Q9BQI6 1058 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 PAGR1Q9BTK6 254 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 MORF4L1Q9UBU8 362 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 FEM1BQ9UK73 627 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 PPP1R9AQ9ULJ8 1098 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 WDR19Q8NEZ3 1342 aa28.35■■■□□ 2.13
SIPA1-210ENST00000534406 PDHBP11177 359 aa28.34■■■□□ 2.13
SIPA1-210ENST00000534406 DSG3P32926 999 aa28.34■■■□□ 2.13
SIPA1-210ENST00000534406 COL9A3Q14050 684 aaPredicted RBP28.34■■■□□ 2.13
SIPA1-210ENST00000534406 ATG4CQ96DT6 458 aa28.34■■■□□ 2.13
SIPA1-210ENST00000534406 RABGAP1Q9Y3P9 1069 aa28.34■■■□□ 2.13
SIPA1-210ENST00000534406 LACTBP83111 547 aaPredicted RBP28.33■■■□□ 2.13
SIPA1-210ENST00000534406 IKQ13123 557 aaPredicted RBP28.33■■■□□ 2.13
SIPA1-210ENST00000534406 KIF22Q14807 665 aa28.33■■■□□ 2.13
SIPA1-210ENST00000534406 KCTD1Q719H9 257 aa28.33■■■□□ 2.13
SIPA1-210ENST00000534406 MB21D1Q8N884 522 aa28.33■■■□□ 2.13
SIPA1-210ENST00000534406 IGDCC4Q8TDY8 1250 aa28.33■■■□□ 2.13
SIPA1-210ENST00000534406 TXNRD2Q9NNW7 524 aa28.33■■■□□ 2.13
SIPA1-210ENST00000534406 ZSWIM8A7E2V4 1837 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 COL11A1P12107 1806 aaPredicted RBP28.32■■■□□ 2.12
SIPA1-210ENST00000534406 MGAMO43451 1857 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 TMEM232C9JQI7 657 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 SH2B2O14492 632 aaPredicted RBP28.32■■■□□ 2.12
SIPA1-210ENST00000534406 SEC24BO95487 1268 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 SNHG28P0DPA3 235 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 STAT2P52630 851 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 DHX32Q7L7V1 743 aaKnown RBP28.32■■■□□ 2.12
SIPA1-210ENST00000534406 FAM160B2Q86V87 743 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 CD99L2Q8TCZ2 262 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 LY9Q9HBG7 655 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 RBPJLQ9UBG7 517 aa28.32■■■□□ 2.12
SIPA1-210ENST00000534406 PSMA5P28066 241 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 ERVK-9P63128 1117 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 ERVK-24P63145 666 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 ZNF543Q08ER8 600 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 BLOC1S2Q6QNY1 142 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 POTEEQ6S8J3 1075 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 PRPF38AQ8NAV1 312 aaKnown RBP28.31■■■□□ 2.12
SIPA1-210ENST00000534406 GPRC5AQ8NFJ5 357 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 CHURC1Q8WUH1 139 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 SENP2Q9HC62 589 aa28.31■■■□□ 2.12
SIPA1-210ENST00000534406 FRMPD2Q68DX3 1309 aaPredicted RBP28.3■■■□□ 2.12
SIPA1-210ENST00000534406 PLA2G6O60733 806 aa28.3■■■□□ 2.12
SIPA1-210ENST00000534406 CNMDO75829 334 aa28.3■■■□□ 2.12
SIPA1-210ENST00000534406 KIFC2Q96AC6 838 aa28.3■■■□□ 2.12
SIPA1-210ENST00000534406 LRRC2Q9BYS8 371 aa28.3■■■□□ 2.12
SIPA1-210ENST00000534406 GPHNQ9NQX3 736 aaPredicted RBP28.3■■■□□ 2.12
SIPA1-210ENST00000534406 PEX10O60683 326 aa28.29■■■□□ 2.12
SIPA1-210ENST00000534406 CASTP20810 708 aaKnown RBP28.29■■■□□ 2.12
SIPA1-210ENST00000534406 ARHGEF6Q15052 776 aa28.29■■■□□ 2.12
SIPA1-210ENST00000534406 GPATCH4Q5T3I0 446 aaKnown RBP28.29■■■□□ 2.12
SIPA1-210ENST00000534406 BTBD7Q9P203 1132 aa28.29■■■□□ 2.12
SIPA1-210ENST00000534406 ADAMTS5Q9UNA0 930 aa28.29■■■□□ 2.12
SIPA1-210ENST00000534406 VWA5AO00534 786 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 LIFRP42702 1097 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 ANAPC15P60006 121 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 CCNA1P78396 465 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 EXOSC10Q01780 885 aaKnown RBP28.28■■■□□ 2.12
SIPA1-210ENST00000534406 ASPRV1Q53RT3 343 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 NFXL1Q6ZNB6 911 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 CATIPQ7Z7H3 387 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 TMTC2Q8N394 836 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 TCEANC2Q96MN5 208 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 GPCPD1Q9NPB8 672 aa28.28■■■□□ 2.12
SIPA1-210ENST00000534406 PARP1P09874 1014 aaKnown RBP28.27■■■□□ 2.12
SIPA1-210ENST00000534406 FCGRTP55899 365 aa28.27■■■□□ 2.12
SIPA1-210ENST00000534406 ARHGAP39Q9C0H5 1083 aa28.27■■■□□ 2.12
SIPA1-210ENST00000534406 CCDC69A6NI79 296 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 CPA1P15085 419 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 RPS6KB1P23443 525 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 PSMC4P43686 418 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 BTNL9Q6UXG8 535 aa28.26■■■□□ 2.11
SIPA1-210ENST00000534406 CTU1Q7Z7A3 348 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms