RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 NLRP5P59047 1200 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 SLC20A2Q08357 652 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 CCDC84Q86UT8 332 aaPredicted RBP11.01□□□□□ -0.65
RTL1-201ENST00000534062 FAM151AQ8WW52 585 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 ZBTB9Q96C00 473 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 SEC63Q9UGP8 760 aaKnown RBP11.01□□□□□ -0.65
RTL1-201ENST00000534062 HACL1Q9UJ83 578 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 SNED1Q8TER0 1413 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 USP17L5A8MUK1 530 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 NRDCO43847 1150 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
RTL1-201ENST00000534062 EAPPQ56P03 285 aaPredicted RBP11.01□□□□□ -0.65
RTL1-201ENST00000534062 FBXO18Q8NFZ0 1043 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
RTL1-201ENST00000534062 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 MYH1P12882 1939 aa11.01□□□□□ -0.65
RTL1-201ENST00000534062 KCTD1Q719H9 257 aa11□□□□□ -0.65
RTL1-201ENST00000534062 PDCL2Q8N4E4 241 aa11□□□□□ -0.65
RTL1-201ENST00000534062 FTOQ9C0B1 505 aaKnown RBP eCLIP11□□□□□ -0.65
RTL1-201ENST00000534062 BRMS1Q9HCU9 246 aa11□□□□□ -0.65
RTL1-201ENST00000534062 GNAQP50148 359 aa11□□□□□ -0.65
RTL1-201ENST00000534062 STK38Q15208 465 aa11□□□□□ -0.65
RTL1-201ENST00000534062 SRBD1Q8N5C6 995 aaKnown RBP11□□□□□ -0.65
RTL1-201ENST00000534062 ZSCAN16Q9H4T2 348 aaPredicted RBP11□□□□□ -0.65
RTL1-201ENST00000534062 GGA3Q9NZ52 723 aa11□□□□□ -0.65
RTL1-201ENST00000534062 FRMD4AQ9P2Q2 1039 aaPredicted RBP11□□□□□ -0.65
RTL1-201ENST00000534062 CCDC39Q9UFE4 941 aa11□□□□□ -0.65
RTL1-201ENST00000534062 NAV1Q8NEY1 1877 aa11□□□□□ -0.65
RTL1-201ENST00000534062 FZD9O00144 591 aa11□□□□□ -0.65
RTL1-201ENST00000534062 EEF2P13639 858 aaKnown RBP11□□□□□ -0.65
RTL1-201ENST00000534062 CAPN2P17655 700 aa11□□□□□ -0.65
RTL1-201ENST00000534062 SLC16A2P36021 539 aa11□□□□□ -0.65
RTL1-201ENST00000534062 SLC1A4P43007 532 aa11□□□□□ -0.65
RTL1-201ENST00000534062 TMTC3Q6ZXV5 915 aa11□□□□□ -0.65
RTL1-201ENST00000534062 ZNF396Q96N95 335 aaPredicted RBP11□□□□□ -0.65
RTL1-201ENST00000534062 DNAJC18Q9H819 358 aa11□□□□□ -0.65
RTL1-201ENST00000534062 BRD2P25440 801 aaKnown RBP10.99□□□□□ -0.65
RTL1-201ENST00000534062 ME1P48163 572 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 GABPAQ06546 454 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 NTRK3Q16288 839 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 PRIMPOLQ96LW4 560 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
RTL1-201ENST00000534062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
RTL1-201ENST00000534062 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 DIS3L2Q8IYB7 885 aaKnown RBP10.99□□□□□ -0.65
RTL1-201ENST00000534062 TRPM4Q8TD43 1214 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 KANSL2Q9H9L4 492 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 FZD1Q9UP38 647 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 ROBO3Q96MS0 1386 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 BTBD18B2RXH4 712 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
RTL1-201ENST00000534062 NBPF11Q86T75 865 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 CFAP45Q9UL16 551 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 LTBP3Q9NS15 1303 aa10.99□□□□□ -0.65
RTL1-201ENST00000534062 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 DPF2Q92785 391 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 RNF26Q9BY78 433 aaPredicted RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 RBM27Q9P2N5 1060 aaKnown RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 TMEM179Q6ZVK1 233 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 NUP88Q99567 741 aaPredicted RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 GPC2Q8N158 579 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 EHD4Q9H223 541 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 LMBRD1Q9NUN5 540 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 RESTQ13127 1097 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 NR5A1Q13285 461 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 SLFN13Q68D06 897 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 CCDC73Q6ZRK6 1079 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 SCAND2PQ9GZW5 306 aaPredicted RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 GPRC5DQ9NZD1 345 aa10.98□□□□□ -0.65
RTL1-201ENST00000534062 HERC5Q9UII4 1024 aaKnown RBP10.98□□□□□ -0.65
RTL1-201ENST00000534062 NAPAP54920 295 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 TCP11L1Q9NUJ3 509 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
RTL1-201ENST00000534062 DLEC1Q9Y238 1755 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 SLFN14P0C7P3 912 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 SCG2P13521 617 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 GRM4Q14833 912 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 NBPF12Q5TAG4 269 aaPredicted RBP10.97□□□□□ -0.65
RTL1-201ENST00000534062 TPM4P67936 248 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 TTBK2Q6IQ55 1244 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 USP28Q96RU2 1077 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 PIGSQ96S52 555 aa10.97□□□□□ -0.65
RTL1-201ENST00000534062 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.97□□□□□ -0.65
RTL1-201ENST00000534062 KIF28PB7ZC32 967 aa10.96□□□□□ -0.65
RTL1-201ENST00000534062 MARCKSP29966 332 aaPredicted RBP10.96□□□□□ -0.65
RTL1-201ENST00000534062 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
RTL1-201ENST00000534062 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
RTL1-201ENST00000534062 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.65
RTL1-201ENST00000534062 MAD2L2Q9UI95 211 aa10.96□□□□□ -0.65
RTL1-201ENST00000534062 TIAM2Q8IVF5 1701 aa10.96□□□□□ -0.65
RTL1-201ENST00000534062 PRPF3O43395 683 aaKnown RBP10.96□□□□□ -0.65
RTL1-201ENST00000534062 PDHBP11177 359 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms