RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 IWS1Q96ST2 819 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 MRGBPQ9NV56 204 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 STOML1Q9UBI4 398 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 SEC63Q9UGP8 760 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 LGALS16A8MUM7 142 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 N4BP1O75113 896 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 EPB41P11171 864 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 SKIP12755 728 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 SKOR1P84550 965 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 FKBP4Q02790 459 aaKnown RBP eCLIP4.49□□□□□ -1.69
SOX6-217ENST00000533870 PROM2Q8N271 834 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 SYN2Q92777 582 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 SAAL1Q96ER3 474 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CCDC43Q96MW1 224 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 MYD88Q99836 296 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 NBPF3Q9H094 633 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 KCNF1Q9H3M0 494 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CENPHQ9H3R5 247 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 ZNF652Q9Y2D9 606 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 FAM187AA6NFU0 413 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 NDUFA10O95299 355 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 BAG3O95817 575 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 HSPD1P10809 573 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 ATP2A2P16615 1042 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 MRPS25P82663 173 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 LRRC63Q05C16 580 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 MORC3Q14149 939 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 KRT71Q3SY84 523 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 INTS8Q75QN2 995 aaKnown RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 MREGQ8N565 214 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CCDC63Q8NA47 563 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 NUP133Q8WUM0 1156 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 CTNNBL1Q8WYA6 563 aaPredicted RBP4.49□□□□□ -1.69
SOX6-217ENST00000533870 SH3GL3Q99963 347 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 ABCB6Q9NP58 842 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 TXLNGQ9NUQ3 528 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 OVOS2A0A0G2JMS6 1433 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 PALLDQ8WX93 1383 aa4.49□□□□□ -1.69
SOX6-217ENST00000533870 UTYO14607 1347 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 PGRMC1O00264 195 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 PCCAP05165 728 aaPredicted RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 MRPS35P82673 323 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 MAN2A1Q16706 1144 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 CCDC93Q567U6 631 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 CAVIN4Q5BKX8 364 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 AGBL2Q5U5Z8 902 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 FAM173BQ6P4H8 233 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 DTHD1Q6ZMT9 781 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 DGKHQ86XP1 1220 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 NEK9Q8TD19 979 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 STAMBPL1Q96FJ0 436 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 CDCA7Q9BWT1 371 aaPredicted RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 PUF60Q9UHX1 559 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 NSFL1CQ9UNZ2 370 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 EIF3HO15372 352 aaKnown RBP eCLIP4.48□□□□□ -1.69
SOX6-217ENST00000533870 PHACTR2O75167 634 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 NR1D1P20393 614 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 ELF1P32519 619 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 EXOSC10Q01780 885 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 CAV1Q03135 178 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 PTH1RQ03431 593 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 SLC9C2Q5TAH2 1124 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 LRCH2Q5VUJ6 765 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 PPP1R21Q6ZMI0 780 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 HACD3Q9P035 362 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 AMOTL2Q9Y2J4 779 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 ADGRB3O60242 1522 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 LRRD1A4D1F6 860 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 RGL2O15211 777 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 FAM107AO95990 144 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 KARSQ15046 597 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 FYB2Q5VWT5 728 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 RESP18Q5W5W9 173 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 COPS6Q7L5N1 327 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 DHX58Q96C10 678 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 NOC4LQ9BVI4 516 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 ZSWIM4Q9H7M6 989 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 HPSEQ9Y251 543 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
SOX6-217ENST00000533870 A0A0D9SFI3 127 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 A0A1W2PQJ5 194 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 PRPF3O43395 683 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 TBCAO75347 108 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 FSBPO95073 299 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 PAPD7Q5XG87 772 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 SV2BQ7L1I2 683 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 KIRREL3Q8IZU9 778 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 UBL4BQ8N7F7 174 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 FANCBQ8NB91 859 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 SLC17A8Q8NDX2 589 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 GRK7Q8WTQ7 553 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 TBC1D5Q92609 795 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 PGBD1Q96JS3 809 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 SH3GLB2Q9NR46 395 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 FGFR1OP2Q9NVK5 253 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 LRP2BPQ9P2M1 347 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 MRPL12P52815 198 aaKnown RBP4.48□□□□□ -1.69
SOX6-217ENST00000533870 NAA25Q14CX7 972 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 VSIG1Q86XK7 387 aa4.48□□□□□ -1.69
SOX6-217ENST00000533870 SREK1Q8WXA9 508 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms