RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 PNMA3Q9UL41 463 aa25.53■■□□□ 1.68
VPS51-212ENST00000533656 USP17L15C9J2P7 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L13C9JLJ4 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L11C9JVI0 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L18D6R9N7 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L22D6RA61 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L17D6RBQ6 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L19D6RCP7 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L20D6RJB6 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 USP17L24Q0WX57 530 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 PTPN18Q99952 460 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 CFHR5Q9BXR6 569 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 AGXT2Q9BYV1 514 aa25.52■■□□□ 1.68
VPS51-212ENST00000533656 CCDC69A6NI79 296 aa25.51■■□□□ 1.67
VPS51-212ENST00000533656 RAD21O60216 631 aa25.51■■□□□ 1.67
VPS51-212ENST00000533656 SOX10P56693 466 aa25.51■■□□□ 1.67
VPS51-212ENST00000533656 MLLT1Q03111 559 aaPredicted RBP25.51■■□□□ 1.67
VPS51-212ENST00000533656 COL9A3Q14050 684 aaPredicted RBP25.51■■□□□ 1.67
VPS51-212ENST00000533656 CATIPQ7Z7H3 387 aa25.51■■□□□ 1.67
VPS51-212ENST00000533656 MYH4Q9Y623 1939 aa25.51■■□□□ 1.67
VPS51-212ENST00000533656 PDHXO00330 501 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 SNHG28P0DPA3 235 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 OSBPP22059 807 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 SLC1A4P43007 532 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 TREML2Q5T2D2 321 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 NFXL1Q6ZNB6 911 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 SPICE1Q8N0Z3 855 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 PARK7Q99497 189 aaKnown RBP25.5■■□□□ 1.67
VPS51-212ENST00000533656 LRRC2Q9BYS8 371 aa25.5■■□□□ 1.67
VPS51-212ENST00000533656 UPF3BQ9BZI7 483 aaKnown RBP25.5■■□□□ 1.67
VPS51-212ENST00000533656 ALDH8A1Q9H2A2 487 aaPredicted RBP25.5■■□□□ 1.67
VPS51-212ENST00000533656 RPAP3Q9H6T3 665 aaPredicted RBP25.5■■□□□ 1.67
VPS51-212ENST00000533656 DDAH1O94760 285 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 BMP3P12645 472 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 CPA1P15085 419 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 NOM1Q5C9Z4 860 aaKnown RBP25.49■■□□□ 1.67
VPS51-212ENST00000533656 KIAA1755Q5JYT7 1200 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 SYNE3Q6ZMZ3 975 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 Q6ZUG5 572 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 FAM43AQ8N2R8 423 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 MAP3K14Q99558 947 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 PDRG1Q9NUG6 133 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 HPS5Q9UPZ3 1129 aa25.49■■□□□ 1.67
VPS51-212ENST00000533656 MYPNQ86TC9 1320 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 CENPFP49454 3210 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 CALM1P0DP23 149 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 CALM2P0DP24 149 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 CALM3P0DP25 149 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 PDHBP11177 359 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 RCAN1P53805 252 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 IRX3P78415 501 aaPredicted RBP25.48■■□□□ 1.67
VPS51-212ENST00000533656 ANKRD1Q15327 319 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 GPATCH4Q5T3I0 446 aaKnown RBP25.48■■□□□ 1.67
VPS51-212ENST00000533656 CATSPERGQ6ZRH7 1159 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 GTF3C2Q8WUA4 911 aaPredicted RBP25.48■■□□□ 1.67
VPS51-212ENST00000533656 TCEANC2Q96MN5 208 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 SLC12A7Q9Y666 1083 aa25.48■■□□□ 1.67
VPS51-212ENST00000533656 PLA2G6O60733 806 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 FKTNO75072 461 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 RABEP1Q15276 862 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 ASPRV1Q53RT3 343 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 FAM83BQ5T0W9 1011 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 ZNF654Q8IZM8 581 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 KIF2CQ99661 725 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 TANGO6Q9C0B7 1094 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 FEM1BQ9UK73 627 aa25.47■■□□□ 1.67
VPS51-212ENST00000533656 TROAPQ12815 778 aa25.46■■□□□ 1.67
VPS51-212ENST00000533656 FAM160B2Q86V87 743 aa25.46■■□□□ 1.67
VPS51-212ENST00000533656 SENP2Q9HC62 589 aa25.46■■□□□ 1.67
VPS51-212ENST00000533656 GPHNQ9NQX3 736 aaPredicted RBP25.46■■□□□ 1.67
VPS51-212ENST00000533656 ZNF543Q08ER8 600 aa25.45■■□□□ 1.66
VPS51-212ENST00000533656 TAF1CQ15572 869 aaPredicted RBP25.45■■□□□ 1.66
VPS51-212ENST00000533656 CCDC96Q2M329 555 aa25.45■■□□□ 1.66
VPS51-212ENST00000533656 CHURC1Q8WUH1 139 aa25.45■■□□□ 1.66
VPS51-212ENST00000533656 BRF1Q92994 677 aa25.45■■□□□ 1.66
VPS51-212ENST00000533656 ASCC2Q9H1I8 757 aaPredicted RBP25.45■■□□□ 1.66
VPS51-212ENST00000533656 ZFYVE28Q9HCC9 887 aa25.45■■□□□ 1.66
VPS51-212ENST00000533656 HOXC10Q9NYD6 342 aa25.45■■□□□ 1.66
VPS51-212ENST00000533656 PDE4DIPQ5VU43 2346 aa25.45■■□□□ 1.66
VPS51-212ENST00000533656 PARP1P09874 1014 aaKnown RBP25.44■■□□□ 1.66
VPS51-212ENST00000533656 KIF5BP33176 963 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 NEK4P51957 841 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 STAT2P52630 851 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 EVCP57679 992 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 COG2Q14746 738 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 APOA5Q6Q788 366 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 LBX2Q6XYB7 198 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 MTMR7Q9Y216 660 aa25.44■■□□□ 1.66
VPS51-212ENST00000533656 ZSWIM8A7E2V4 1837 aa25.43■■□□□ 1.66
VPS51-212ENST00000533656 KLF18A0A0U1RQI7 1052 aa25.43■■□□□ 1.66
VPS51-212ENST00000533656 FLOT1O75955 427 aa25.43■■□□□ 1.66
VPS51-212ENST00000533656 FDX1P10109 184 aa25.43■■□□□ 1.66
VPS51-212ENST00000533656 GCLCP48506 637 aaPredicted RBP25.43■■□□□ 1.66
VPS51-212ENST00000533656 GRM4Q14833 912 aa25.43■■□□□ 1.66
VPS51-212ENST00000533656 PPP2R5BQ15173 497 aa25.43■■□□□ 1.66
VPS51-212ENST00000533656 CTCFLQ8NI51 663 aaPredicted RBP25.43■■□□□ 1.66
VPS51-212ENST00000533656 SMCR8Q8TEV9 937 aaPredicted RBP25.43■■□□□ 1.66
VPS51-212ENST00000533656 NUP88Q99567 741 aaPredicted RBP25.43■■□□□ 1.66
VPS51-212ENST00000533656 ISY1Q9ULR0 285 aaKnown RBP25.43■■□□□ 1.66
VPS51-212ENST00000533656 ZBTB43O43298 467 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms