RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NIM1KQ8IY84 436 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 CHURC1Q8WUH1 139 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 TSC1Q92574 1164 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 NAP1L3Q99457 506 aaPredicted RBP19.5■□□□□ 0.71
PHRF1-205ENST00000533464 RCOR1Q9UKL0 485 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 XDHP47989 1333 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 KIF23Q02241 960 aaPredicted RBP19.5■□□□□ 0.71
PHRF1-205ENST00000533464 SFMBT2Q5VUG0 894 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.5■□□□□ 0.71
PHRF1-205ENST00000533464 PCDHB13Q9Y5F0 798 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 FMNL1O95466 1100 aaPredicted RBP19.5■□□□□ 0.71
PHRF1-205ENST00000533464 PRKG1Q13976 671 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 GPBP1Q86WP2 473 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 MYOCDQ8IZQ8 938 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 CSRNP2Q9H175 543 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 GAS7O60861 476 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 CERKLQ49MI3 558 aaPredicted RBP19.5■□□□□ 0.71
PHRF1-205ENST00000533464 IFIH1Q9BYX4 1025 aaKnown RBP19.5■□□□□ 0.71
PHRF1-205ENST00000533464 LEMD3Q9Y2U8 911 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 SPATA1Q5VX52 437 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.49■□□□□ 0.71
PHRF1-205ENST00000533464 STRN3Q13033 797 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 FAM182BQ5T319 152 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 LINC00301Q8NCQ3 95 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 ZSWIM5Q9P217 1185 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 PPP6R2O75170 966 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 FLOT1O75955 427 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 FAM196AQ6ZSG2 479 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 KDM3AQ9Y4C1 1321 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 RDH13Q8NBN7 331 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 TSNARE1Q96NA8 513 aa19.49■□□□□ 0.71
PHRF1-205ENST00000533464 H7C1D1 291 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 CEP104O60308 925 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 STX10O60499 249 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 COMMD10Q9Y6G5 202 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 A0A087WWV3 80 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 PIH1D3Q9NQM4 214 aaKnown RBP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 CTTNBP2NLQ9P2B4 639 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 RASGRF1Q13972 1273 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 DPCR1Q3MIW9 517 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 CPLX4Q7Z7G2 160 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 EEF2KMTQ96G04 330 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 ARAP3Q8WWN8 1544 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 RNF17Q9BXT8 1623 aaKnown RBP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 SH2B2O14492 632 aaPredicted RBP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 RPN1P04843 607 aaKnown RBP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 LONP1P36776 959 aaKnown RBP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 ICA1Q05084 483 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 TMEM87AQ8NBN3 555 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 DNM2P50570 870 aa19.48■□□□□ 0.71
PHRF1-205ENST00000533464 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.48■□□□□ 0.71
PHRF1-205ENST00000533464 NR5A1Q13285 461 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 NRBP1Q9UHY1 535 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 ATP10DQ9P241 1426 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 NUCKS1Q9H1E3 243 aaKnown RBP19.47■□□□□ 0.71
PHRF1-205ENST00000533464 GPHNQ9NQX3 736 aaPredicted RBP19.47■□□□□ 0.71
PHRF1-205ENST00000533464 PNPLA6Q8IY17 1366 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 SUSD4Q5VX71 490 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 RASGRP4Q8TDF6 673 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 IFNAR1P17181 557 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 ETF1P62495 437 aaKnown RBP19.47■□□□□ 0.71
PHRF1-205ENST00000533464 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 SLC39A2Q9NP94 309 aa19.47■□□□□ 0.71
PHRF1-205ENST00000533464 NOP56O00567 594 aaKnown RBP19.46■□□□□ 0.71
PHRF1-205ENST00000533464 STAMBPO95630 424 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 HLFQ16534 295 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 SLFN13Q68D06 897 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 BRINP3Q76B58 766 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 NLGN1Q8N2Q7 840 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 TRIM31Q9BZY9 425 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 PPP2R2CQ9Y2T4 447 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 GLI2P10070 1586 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 SLFNL1Q499Z3 407 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 DDX25Q9UHL0 483 aaKnown RBP19.46■□□□□ 0.71
PHRF1-205ENST00000533464 SPATA31A3Q5VYP0 1347 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 FBXO11Q86XK2 927 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 ANKS4BQ8N8V4 417 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 KCNK9Q9NPC2 374 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 PYCARDQ9ULZ3 195 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 PCDHA1Q9Y5I3 950 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 UNC13BO14795 1591 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 TCP10L2B9ZVM9 353 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 GNA14O95837 355 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 TRPC3Q13507 836 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 C11orf57Q6ZUT1 292 aaPredicted RBP19.46■□□□□ 0.71
PHRF1-205ENST00000533464 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 TTC14Q96N46 770 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
PHRF1-205ENST00000533464 XRCC5P13010 732 aaKnown RBP19.45■□□□□ 0.7
PHRF1-205ENST00000533464 ZNF354CQ86Y25 554 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 KLHL7Q8IXQ5 586 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 IFT20Q8IY31 132 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 IQCDQ96DY2 449 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 HOOK2Q96ED9 719 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 GINS2Q9Y248 185 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 SOS2Q07890 1332 aaPredicted RBP19.45■□□□□ 0.7
PHRF1-205ENST00000533464 BCRP11274 1271 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 MNAT1P51948 309 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms