RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 FLOT1O75955 427 aa13.53□□□□□ -0.24
CLCF1-202ENST00000533438 ERCC3P19447 782 aa13.53□□□□□ -0.24
CLCF1-202ENST00000533438 MX1P20591 662 aa13.53□□□□□ -0.24
CLCF1-202ENST00000533438 LRRFIP1Q32MZ4 808 aaKnown RBP13.53□□□□□ -0.24
CLCF1-202ENST00000533438 SEC62Q99442 399 aaKnown RBP13.53□□□□□ -0.24
CLCF1-202ENST00000533438 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
CLCF1-202ENST00000533438 STAP2Q9UGK3 403 aa13.53□□□□□ -0.24
CLCF1-202ENST00000533438 ADAMTS5Q9UNA0 930 aa13.53□□□□□ -0.24
CLCF1-202ENST00000533438 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
CLCF1-202ENST00000533438 PATL2C9JE40 543 aaKnown RBP13.52□□□□□ -0.25
CLCF1-202ENST00000533438 ADORA2AP29274 412 aa13.52□□□□□ -0.25
CLCF1-202ENST00000533438 MFSD14CQ5VZR4 134 aa13.52□□□□□ -0.25
CLCF1-202ENST00000533438 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.25
CLCF1-202ENST00000533438 C11orf49Q9H6J7 331 aa13.52□□□□□ -0.25
CLCF1-202ENST00000533438 GOPCQ9HD26 462 aa13.52□□□□□ -0.25
CLCF1-202ENST00000533438 NYAP2Q9P242 653 aa13.52□□□□□ -0.25
CLCF1-202ENST00000533438 PFASO15067 1338 aa13.52□□□□□ -0.25
CLCF1-202ENST00000533438 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 COL6A1P12109 1028 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 TDO2P48775 406 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 TMEM132BQ14DG7 1078 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 ZMYM1Q5SVZ6 1142 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 ABRAQ8N0Z2 381 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 LRCH3Q96II8 777 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 FSD1Q9BTV5 496 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 MROH8Q9H579 483 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 MKNK2Q9HBH9 465 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 FBXO28Q9NVF7 368 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
CLCF1-202ENST00000533438 COBLO75128 1261 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 CYBAP13498 195 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 CYP2C19P33261 490 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 HDAC1Q13547 482 aaPredicted RBP13.5□□□□□ -0.25
CLCF1-202ENST00000533438 PLS1Q14651 629 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 OLFML2BQ68BL8 750 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 DPP9Q86TI2 863 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 REPS2Q8NFH8 660 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
CLCF1-202ENST00000533438 PLIN4Q96Q06 1357 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 VWA5AO00534 786 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 SLC25A27O95847 323 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 APPP05067 770 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 FAM83BQ5T0W9 1011 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 ANKRD45Q5TZF3 282 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 NCAPG2Q86XI2 1143 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 MKL1Q969V6 931 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
CLCF1-202ENST00000533438 DDX20Q9UHI6 824 aaKnown RBP13.49□□□□□ -0.25
CLCF1-202ENST00000533438 ZNF214Q9UL59 606 aaPredicted RBP13.49□□□□□ -0.25
CLCF1-202ENST00000533438 LAMA2P24043 3122 aaKnown RBP13.48□□□□□ -0.25
CLCF1-202ENST00000533438 F5H6K3 240 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 FOXP2O15409 715 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 MSCO60682 206 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 PRDM1O75626 825 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 KLRC3Q07444 240 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
CLCF1-202ENST00000533438 RIOX2Q8IUF8 465 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 ZNF444Q8N0Y2 327 aaPredicted RBP13.48□□□□□ -0.25
CLCF1-202ENST00000533438 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 MTMR4Q9NYA4 1195 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 STXBP5LQ9Y2K9 1186 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
CLCF1-202ENST00000533438 RAD21O60216 631 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 NDUFB10O96000 172 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 FCER1AP12319 257 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 CNGA1P29973 690 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 PDE1AP54750 535 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 PPARAQ07869 468 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 MAML3Q96JK9 1138 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
CLCF1-202ENST00000533438 NAPBQ9H115 298 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 SLC5A4Q9NY91 659 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 CLIP2Q9UDT6 1046 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
CLCF1-202ENST00000533438 DNAH12Q6ZR08 3092 aa13.47□□□□□ -0.25
CLCF1-202ENST00000533438 CUL9Q8IWT3 2517 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 SMCHD1A6NHR9 2005 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 STAT3P40763 770 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 PDE4BQ07343 736 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 FAM109BQ6ICB4 259 aaPredicted RBP13.46□□□□□ -0.25
CLCF1-202ENST00000533438 CCDC129Q6ZRS4 1044 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 TDHQ8IZJ6 230 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 DEFB123Q8N688 67 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 NEDD1Q8NHV4 660 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 EVI5LQ96CN4 794 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 SLF1Q9BQI6 1058 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 PPP4R2Q9NY27 417 aa13.46□□□□□ -0.25
CLCF1-202ENST00000533438 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
CLCF1-202ENST00000533438 TTLL1O95922 423 aa13.45□□□□□ -0.26
CLCF1-202ENST00000533438 COPB2P35606 906 aa13.45□□□□□ -0.26
CLCF1-202ENST00000533438 LRRC26Q2I0M4 334 aa13.45□□□□□ -0.26
CLCF1-202ENST00000533438 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms