RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 NOVP48745 357 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 MTFR1Q15390 333 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 CATSPERGQ6ZRH7 1159 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 MKL1Q969V6 931 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 TXNRD2Q9NNW7 524 aa17.13■□□□□ 0.33
CSRP1-217ENST00000533188 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
CSRP1-217ENST00000533188 E7EWF7 191 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 F5H6K3 240 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 PRKCZQ05513 592 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 KLRC3Q07444 240 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 COL9A3Q14050 684 aaPredicted RBP17.12■□□□□ 0.33
CSRP1-217ENST00000533188 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 RCSD1Q6JBY9 416 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 CYB5R4Q7L1T6 521 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 KRT23Q9C075 422 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 CNNM2Q9H8M5 875 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 TCP11L1Q9NUJ3 509 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 GABRQQ9UN88 632 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 MYPNQ86TC9 1320 aa17.12■□□□□ 0.33
CSRP1-217ENST00000533188 FLOT1O75955 427 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 HOXD10P28358 340 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 GCLCP48506 637 aaPredicted RBP17.11■□□□□ 0.33
CSRP1-217ENST00000533188 NECTIN1Q15223 517 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 FAM110CQ1W6H9 321 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
CSRP1-217ENST00000533188 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 PAGR1Q9BTK6 254 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 ZSWIM5Q9P217 1185 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 SYNPO2Q9UMS6 1093 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 MTMR7Q9Y216 660 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 SZT2Q5T011 3432 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 TNKSO95271 1327 aa17.11■□□□□ 0.33
CSRP1-217ENST00000533188 CNMDO75829 334 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 GRK4P32298 578 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 FCGRTP55899 365 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 PPP4R3BQ5MIZ7 849 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 ENAHQ8N8S7 591 aaPredicted RBP17.1■□□□□ 0.33
CSRP1-217ENST00000533188 RAET1EQ8TD07 263 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 ATG4CQ96DT6 458 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 RBPJLQ9UBG7 517 aa17.1■□□□□ 0.33
CSRP1-217ENST00000533188 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
CSRP1-217ENST00000533188 ANTXR2P58335 489 aa17.09■□□□□ 0.33
CSRP1-217ENST00000533188 TRDNQ13061 729 aa17.09■□□□□ 0.33
CSRP1-217ENST00000533188 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
CSRP1-217ENST00000533188 IQCA1Q86XH1 822 aa17.09■□□□□ 0.33
CSRP1-217ENST00000533188 MB21D2Q8IYB1 491 aaPredicted RBP17.09■□□□□ 0.33
CSRP1-217ENST00000533188 GMCL1Q96IK5 515 aa17.09■□□□□ 0.33
CSRP1-217ENST00000533188 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
CSRP1-217ENST00000533188 BTBD7Q9P203 1132 aa17.09■□□□□ 0.33
CSRP1-217ENST00000533188 MORF4L1Q9UBU8 362 aa17.09■□□□□ 0.33
CSRP1-217ENST00000533188 ISY1Q9ULR0 285 aaKnown RBP17.09■□□□□ 0.33
CSRP1-217ENST00000533188 NT5C2P49902 561 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 COG2Q14746 738 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 UBAC1Q9BSL1 405 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 GTF3C3Q9Y5Q9 886 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 TRIOBPQ9H2D6 2365 aa17.08■□□□□ 0.32
CSRP1-217ENST00000533188 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 REC8O95072 547 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 BMP3P12645 472 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 MCCP23508 829 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 DSG3P32926 999 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 SLC1A4P43007 532 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 FLT3LGP49771 235 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 ERVK-9P63128 1117 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 ERVK-24P63145 666 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 GTF3C2Q8WUA4 911 aaPredicted RBP17.07■□□□□ 0.32
CSRP1-217ENST00000533188 PPP1R9AQ9ULJ8 1098 aa17.07■□□□□ 0.32
CSRP1-217ENST00000533188 FRMPD2Q68DX3 1309 aaPredicted RBP17.06■□□□□ 0.32
CSRP1-217ENST00000533188 LAMA3Q16787 3333 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 SEC23AQ15436 765 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 Q3C1V9 767 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 KCTD1Q719H9 257 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 UBE2Q1Q7Z7E8 422 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 DGKHQ86XP1 1220 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 GPRC5AQ8NFJ5 357 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 PORCNQ9H237 461 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 SENP2Q9HC62 589 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 RABGAP1Q9Y3P9 1069 aa17.06■□□□□ 0.32
CSRP1-217ENST00000533188 GJB1P08034 283 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 PDHBP11177 359 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 CCL5P13501 91 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 GJA8P48165 433 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 IRF5Q13568 498 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 SLAIN1Q8ND83 568 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 PNMA1Q8ND90 353 aa17.05■□□□□ 0.32
CSRP1-217ENST00000533188 DCAF4Q8WV16 495 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms