RNA–Protein interactions for RNA: ENST00000532962.5

ALKBH3-210, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 1 (best)

Gene ALKBH3, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-210ENST00000532962 SHROOM1Q2M3G4 852 aaPredicted RBP20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 NOSTRINQ8IVI9 506 aa20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 DCAF4Q8WV16 495 aa20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 USP28Q96RU2 1077 aa20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 ARHGEF10LQ9HCE6 1279 aa20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 RTEL1Q9NZ71 1219 aa20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 SEC63Q9UGP8 760 aaKnown RBP20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 RCOR1Q9UKL0 485 aa20.93■□□□□ 0.94
ALKBH3-210ENST00000532962 BTBD18B2RXH4 712 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 CYTH3O43739 400 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 RAD21O60216 631 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 CALML3P27482 149 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 SLFN13Q68D06 897 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 CDAN1Q8IWY9 1227 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 HOOK2Q96ED9 719 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 DEFB129Q9H1M3 183 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 VAT1LQ9HCJ6 419 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 ISY1Q9ULR0 285 aaKnown RBP20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 SYNPO2Q9UMS6 1093 aa20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 BAZ2BQ9UIF8 2168 aaKnown RBP20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 ASTN2O75129 1339 aaPredicted RBP20.92■□□□□ 0.94
ALKBH3-210ENST00000532962 EPS15P42566 896 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 GSE1Q14687 1217 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 TPRNQ4KMQ1 711 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 CAVIN1Q6NZI2 390 aaKnown RBP20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 RASGRP2Q7LDG7 609 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 SIAH1Q8IUQ4 282 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 FAM177A1Q8N128 213 aaPredicted RBP20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 TRPM4Q8TD43 1214 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 SYAP1Q96A49 352 aaPredicted RBP20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 TEPSINQ96N21 525 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 UBA5Q9GZZ9 404 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 ZBTB21Q9ULJ3 1066 aa20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 SCAF8Q9UPN6 1271 aaKnown RBP20.91■□□□□ 0.94
ALKBH3-210ENST00000532962 DDNO94850 711 aaPredicted RBP20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 CAP2P40123 477 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 SLC1A4P43007 532 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 JAG1P78504 1218 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 STK38Q15208 465 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 SLC35G1Q2M3R5 365 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 ANGEL2Q5VTE6 544 aaKnown RBP20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 HEATR3Q7Z4Q2 680 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 GMCL1P1Q8NEA9 526 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 CCDC148Q8NFR7 591 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 RIOX1Q9H6W3 641 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 POLR3EQ9NVU0 708 aa20.9■□□□□ 0.94
ALKBH3-210ENST00000532962 YEATS4O95619 227 aa20.89■□□□□ 0.93
ALKBH3-210ENST00000532962 SF3A1Q15459 793 aaKnown RBP20.89■□□□□ 0.93
ALKBH3-210ENST00000532962 ANO1Q5XXA6 986 aa20.89■□□□□ 0.93
ALKBH3-210ENST00000532962 DCAF15Q66K64 600 aa20.89■□□□□ 0.93
ALKBH3-210ENST00000532962 CCDC12Q8WUD4 166 aaPredicted RBP20.89■□□□□ 0.93
ALKBH3-210ENST00000532962 FTOQ9C0B1 505 aaKnown RBP eCLIP20.89■□□□□ 0.93
ALKBH3-210ENST00000532962 CPVLQ9H3G5 476 aa20.89■□□□□ 0.93
ALKBH3-210ENST00000532962 F5H6K3 240 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 KLRC3Q07444 240 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 GALNT17Q6IS24 598 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 DPY19L2Q6NUT2 758 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 KCNG4Q8TDN1 519 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 GPKOWQ92917 476 aaPredicted RBP eCLIP20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 SHISA4Q96DD7 197 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 ADARB2Q9NS39 739 aaKnown RBP20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 GINM1Q9NU53 330 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 BARHL2Q9NY43 387 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 CLIC4Q9Y696 253 aa20.88■□□□□ 0.93
ALKBH3-210ENST00000532962 GRIN3BO60391 1043 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 ASNSP08243 561 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 NASPP49321 788 aaPredicted RBP20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 NR5A1Q13285 461 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 RILPL1Q5EBL4 403 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 WWC2Q6AWC2 1192 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 KCTD1Q719H9 257 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 OXER1Q8TDS5 423 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 GMCL1Q96IK5 515 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 PIGSQ96S52 555 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 SH2D4AQ9H788 454 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 GOPCQ9HD26 462 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 PPP2R3BQ9Y5P8 575 aa20.87■□□□□ 0.93
ALKBH3-210ENST00000532962 hCG_1984214I3L0E3 225 aa20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 STXBP3O00186 592 aa20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 NDUFB10O96000 172 aa20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 VEGFAP15692 232 aaPredicted RBP20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 ME1P48163 572 aa20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 ADGRF4Q8IZF3 695 aa20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 ZNF713Q8N859 430 aaPredicted RBP20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 LINC00301Q8NCQ3 95 aa20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 GGA3Q9NZ52 723 aa20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 NOL7Q9UMY1 257 aaKnown RBP20.86■□□□□ 0.93
ALKBH3-210ENST00000532962 PHF20L1A8MW92 1017 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 SPTLC2O15270 562 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 HIRAP54198 1017 aaPredicted RBP20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 NAPAP54920 295 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 NBPF12Q5TAG4 269 aaPredicted RBP20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 TTBK2Q6IQ55 1244 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 BLIDQ8IZY5 108 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 BICD2Q8TD16 824 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 ZNF341Q9BYN7 854 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 PCDHA4Q9UN74 947 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 TMX2Q9Y320 296 aa20.85■□□□□ 0.93
ALKBH3-210ENST00000532962 PNMA6FA0A0J9YX94 578 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms