RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MORN1Q5T089 497 aa27.22■■□□□ 1.95
CAPN1-222ENST00000532285 SPATC1LQ9H0A9 340 aa27.22■■□□□ 1.95
CAPN1-222ENST00000532285 ADAMTS5Q9UNA0 930 aa27.22■■□□□ 1.95
CAPN1-222ENST00000532285 XRCC5P13010 732 aaKnown RBP27.21■■□□□ 1.95
CAPN1-222ENST00000532285 WDR78Q5VTH9 848 aa27.21■■□□□ 1.95
CAPN1-222ENST00000532285 SAMD1Q6SPF0 538 aaPredicted RBP27.21■■□□□ 1.95
CAPN1-222ENST00000532285 GMCL1P1Q8NEA9 526 aa27.21■■□□□ 1.95
CAPN1-222ENST00000532285 USP6NLQ92738 828 aa27.21■■□□□ 1.95
CAPN1-222ENST00000532285 TOMM22Q9NS69 142 aa27.21■■□□□ 1.95
CAPN1-222ENST00000532285 FBXO28Q9NVF7 368 aa27.21■■□□□ 1.95
CAPN1-222ENST00000532285 PCP11498 1178 aaKnown RBP27.2■■□□□ 1.94
CAPN1-222ENST00000532285 CYP2B6P20813 491 aa27.2■■□□□ 1.94
CAPN1-222ENST00000532285 HAND2P61296 217 aa27.2■■□□□ 1.94
CAPN1-222ENST00000532285 DSCC1Q9BVC3 393 aa27.2■■□□□ 1.94
CAPN1-222ENST00000532285 MOV10L1Q9BXT6 1211 aaKnown RBP27.2■■□□□ 1.94
CAPN1-222ENST00000532285 RNF208Q9H0X6 261 aa27.2■■□□□ 1.94
CAPN1-222ENST00000532285 PPP1R9AQ9ULJ8 1098 aa27.2■■□□□ 1.94
CAPN1-222ENST00000532285 IVNS1ABPQ9Y6Y0 642 aa27.2■■□□□ 1.94
CAPN1-222ENST00000532285 SLC15A5A6NIM6 579 aa27.19■■□□□ 1.94
CAPN1-222ENST00000532285 HMGCRP04035 888 aa27.19■■□□□ 1.94
CAPN1-222ENST00000532285 RGS2P41220 211 aa27.19■■□□□ 1.94
CAPN1-222ENST00000532285 AKNAD1Q5T1N1 836 aa27.19■■□□□ 1.94
CAPN1-222ENST00000532285 MFSD6Q6ZSS7 791 aa27.19■■□□□ 1.94
CAPN1-222ENST00000532285 CENPQQ7L2Z9 268 aaPredicted RBP27.19■■□□□ 1.94
CAPN1-222ENST00000532285 TRMT44Q8IYL2 757 aaKnown RBP27.19■■□□□ 1.94
CAPN1-222ENST00000532285 LRRC47Q8N1G4 583 aaKnown RBP27.19■■□□□ 1.94
CAPN1-222ENST00000532285 SHCBP1Q8NEM2 672 aa27.19■■□□□ 1.94
CAPN1-222ENST00000532285 NUP88Q99567 741 aaPredicted RBP27.19■■□□□ 1.94
CAPN1-222ENST00000532285 IL17RBQ9NRM6 502 aa27.19■■□□□ 1.94
CAPN1-222ENST00000532285 ZNFX1Q9P2E3 1918 aaKnown RBP27.18■■□□□ 1.94
CAPN1-222ENST00000532285 ZNF213O14771 459 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 PTPREP23469 700 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 PLS1Q14651 629 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 RRP12Q5JTH9 1297 aaKnown RBP27.18■■□□□ 1.94
CAPN1-222ENST00000532285 NKX2-3Q8TAU0 364 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 STAG1Q8WVM7 1258 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 RUFY2Q8WXA3 655 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 SLF1Q9BQI6 1058 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 UNC93B1Q9H1C4 597 aa27.18■■□□□ 1.94
CAPN1-222ENST00000532285 RNF41Q9H4P4 317 aaPredicted RBP27.18■■□□□ 1.94
CAPN1-222ENST00000532285 VWA5AO00534 786 aa27.17■■□□□ 1.94
CAPN1-222ENST00000532285 STRNO43815 780 aa27.17■■□□□ 1.94
CAPN1-222ENST00000532285 GJB1P08034 283 aa27.17■■□□□ 1.94
CAPN1-222ENST00000532285 MAP2K5Q13163 448 aa27.17■■□□□ 1.94
CAPN1-222ENST00000532285 NBPF3Q9H094 633 aa27.17■■□□□ 1.94
CAPN1-222ENST00000532285 MROH8Q9H579 483 aa27.17■■□□□ 1.94
CAPN1-222ENST00000532285 STX8Q9UNK0 236 aa27.17■■□□□ 1.94
CAPN1-222ENST00000532285 RAD50Q92878 1312 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 ZNF236Q9UL36 1845 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 NMT2O60551 498 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 ERCC3P19447 782 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 TMEM132BQ14DG7 1078 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 SLFN13Q68D06 897 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 PRPF38AQ8NAV1 312 aaKnown RBP27.16■■□□□ 1.94
CAPN1-222ENST00000532285 APBA2Q99767 749 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 CTNNA3Q9UI47 895 aa27.16■■□□□ 1.94
CAPN1-222ENST00000532285 SLC25A27O95847 323 aa27.15■■□□□ 1.94
CAPN1-222ENST00000532285 CHMLP26374 656 aa27.15■■□□□ 1.94
CAPN1-222ENST00000532285 NOVP48745 357 aa27.15■■□□□ 1.94
CAPN1-222ENST00000532285 GRB14Q14449 540 aa27.15■■□□□ 1.94
CAPN1-222ENST00000532285 TRIB2Q92519 343 aa27.15■■□□□ 1.94
CAPN1-222ENST00000532285 TCP11L1Q9NUJ3 509 aa27.15■■□□□ 1.94
CAPN1-222ENST00000532285 FEM1BQ9UK73 627 aa27.15■■□□□ 1.94
CAPN1-222ENST00000532285 MKI67P46013 3256 aaKnown RBP27.14■■□□□ 1.94
CAPN1-222ENST00000532285 BMP3P12645 472 aa27.14■■□□□ 1.94
CAPN1-222ENST00000532285 ZKSCAN1P17029 563 aaPredicted RBP27.14■■□□□ 1.94
CAPN1-222ENST00000532285 GJA8P48165 433 aa27.14■■□□□ 1.94
CAPN1-222ENST00000532285 NCAPG2Q86XI2 1143 aa27.14■■□□□ 1.94
CAPN1-222ENST00000532285 TBC1D10CQ8IV04 446 aa27.14■■□□□ 1.94
CAPN1-222ENST00000532285 NT5C2P49902 561 aa27.13■■□□□ 1.93
CAPN1-222ENST00000532285 IMMTQ16891 758 aaKnown RBP27.13■■□□□ 1.93
CAPN1-222ENST00000532285 RIOX2Q8IUF8 465 aa27.13■■□□□ 1.93
CAPN1-222ENST00000532285 REPS2Q8NFH8 660 aa27.13■■□□□ 1.93
CAPN1-222ENST00000532285 GMCL1Q96IK5 515 aa27.13■■□□□ 1.93
CAPN1-222ENST00000532285 IL25Q9H293 177 aa27.13■■□□□ 1.93
CAPN1-222ENST00000532285 RPTORQ8N122 1335 aa27.13■■□□□ 1.93
CAPN1-222ENST00000532285 PDE4DIPQ5VU43 2346 aa27.12■■□□□ 1.93
CAPN1-222ENST00000532285 HOXC6P09630 235 aa27.12■■□□□ 1.93
CAPN1-222ENST00000532285 CAPN2P17655 700 aa27.12■■□□□ 1.93
CAPN1-222ENST00000532285 STAT3P40763 770 aa27.12■■□□□ 1.93
CAPN1-222ENST00000532285 ABRAQ8N0Z2 381 aa27.12■■□□□ 1.93
CAPN1-222ENST00000532285 ESR2Q92731 530 aa27.12■■□□□ 1.93
CAPN1-222ENST00000532285 HMX1Q9NP08 348 aaPredicted RBP27.12■■□□□ 1.93
CAPN1-222ENST00000532285 PAK6Q9NQU5 681 aaPredicted RBP27.12■■□□□ 1.93
CAPN1-222ENST00000532285 ZNF214Q9UL59 606 aaPredicted RBP27.12■■□□□ 1.93
CAPN1-222ENST00000532285 ZBED4O75132 1171 aa27.11■■□□□ 1.93
CAPN1-222ENST00000532285 SGPL1O95470 568 aa27.11■■□□□ 1.93
CAPN1-222ENST00000532285 COPB2P35606 906 aa27.11■■□□□ 1.93
CAPN1-222ENST00000532285 SLC1A4P43007 532 aa27.11■■□□□ 1.93
CAPN1-222ENST00000532285 TRIM32Q13049 653 aa27.11■■□□□ 1.93
CAPN1-222ENST00000532285 CCL14Q16627 93 aa27.11■■□□□ 1.93
CAPN1-222ENST00000532285 U2AF1L4Q8WU68 220 aaKnown RBP27.11■■□□□ 1.93
CAPN1-222ENST00000532285 MCCP23508 829 aa27.1■■□□□ 1.93
CAPN1-222ENST00000532285 ADORA2AP29274 412 aa27.1■■□□□ 1.93
CAPN1-222ENST00000532285 DPP9Q86TI2 863 aa27.1■■□□□ 1.93
CAPN1-222ENST00000532285 CHURC1Q8WUH1 139 aa27.1■■□□□ 1.93
CAPN1-222ENST00000532285 KIFC2Q96AC6 838 aa27.1■■□□□ 1.93
CAPN1-222ENST00000532285 SHISA4Q96DD7 197 aa27.1■■□□□ 1.93
CAPN1-222ENST00000532285 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.1■■□□□ 1.93
CAPN1-222ENST00000532285 CTDP1Q9Y5B0 961 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms