RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
CMTM1-215ENST00000531885 MYLIPQ8WY64 445 aa13.93□□□□□ -0.18
CMTM1-215ENST00000531885 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
CMTM1-215ENST00000531885 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
CMTM1-215ENST00000531885 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
CMTM1-215ENST00000531885 ATP8A2Q9NTI2 1148 aa13.93□□□□□ -0.18
CMTM1-215ENST00000531885 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
CMTM1-215ENST00000531885 TRIM43BA6NCK2 446 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 DCDC2CA8MYV0 355 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 PQBP1O60828 265 aaKnown RBP13.92□□□□□ -0.18
CMTM1-215ENST00000531885 AKR1A1P14550 325 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 FPGSQ05932 587 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.92□□□□□ -0.18
CMTM1-215ENST00000531885 NUP133Q8WUM0 1156 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 TRIM43Q96BQ3 446 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-215ENST00000531885 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 IL1RAPL2Q9NP60 686 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 TMEM39AQ9NV64 488 aa13.92□□□□□ -0.18
CMTM1-215ENST00000531885 DIS3Q9Y2L1 958 aaKnown RBP13.92□□□□□ -0.18
CMTM1-215ENST00000531885 HMMRO75330 724 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 TMEM132BQ14DG7 1078 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 SH3RF1Q7Z6J0 888 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 RIOX2Q8IUF8 465 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 LCORLQ8N3X6 602 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 BCL11AQ9H165 835 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
CMTM1-215ENST00000531885 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
CMTM1-215ENST00000531885 MROH7Q68CQ1 1323 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 ZNFX1Q9P2E3 1918 aaKnown RBP13.9□□□□□ -0.18
CMTM1-215ENST00000531885 A0A1W2PQ45 241 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-215ENST00000531885 A0A1W2PQY0 241 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 KIAA0355O15063 1070 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 PGK1P00558 417 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 PGK2P07205 417 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 CYP2D6P10635 497 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 AKR1B1P15121 316 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 STAT3P40763 770 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 MSL3Q8N5Y2 521 aaKnown RBP13.9□□□□□ -0.18
CMTM1-215ENST00000531885 DYNLL2Q96FJ2 89 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 TSEN34Q9BSV6 310 aaKnown RBP13.9□□□□□ -0.18
CMTM1-215ENST00000531885 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-215ENST00000531885 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 SPC25Q9HBM1 224 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 STARD7Q9NQZ5 370 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 ROBO3Q96MS0 1386 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
CMTM1-215ENST00000531885 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-215ENST00000531885 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.89□□□□□ -0.19
CMTM1-215ENST00000531885 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 APBB1O00213 710 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 MBD4O95243 580 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 MS4A1P11836 297 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 CDK8P49336 464 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 DDX11Q96FC9 970 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 PAG1Q9NWQ8 432 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 PPP1R9AQ9ULJ8 1098 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 SMCHD1A6NHR9 2005 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
CMTM1-215ENST00000531885 TCRBV5S4A2TA0A5A2 114 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 VWA5AO00534 786 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 EEF2P13639 858 aaKnown RBP13.88□□□□□ -0.19
CMTM1-215ENST00000531885 ZNF792Q3KQV3 632 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 C16orf86Q6ZW13 317 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 CLEC10AQ8IUN9 316 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 GLT1D1Q96MS3 346 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 TEX13BQ9BXU2 312 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 PRDM6Q9NQX0 595 aa13.88□□□□□ -0.19
CMTM1-215ENST00000531885 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
CMTM1-215ENST00000531885 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 USP17L21D6R901 530 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 RAB11FIP3O75154 756 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 DNAJB2P25686 324 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 ADD2P35612 726 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 EVX2Q03828 476 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 PPIGQ13427 754 aaKnown RBP eCLIP13.87□□□□□ -0.19
CMTM1-215ENST00000531885 C12orf60Q5U649 245 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 ANKRD33Q7Z3H0 272 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
CMTM1-215ENST00000531885 FBXO28Q9NVF7 368 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 ZHX1Q9UKY1 873 aaPredicted RBP13.87□□□□□ -0.19
CMTM1-215ENST00000531885 ADAMTS5Q9UNA0 930 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 SYNGAP1Q96PV0 1343 aa13.87□□□□□ -0.19
CMTM1-215ENST00000531885 BAZ2AQ9UIF9 1905 aaKnown RBP13.86□□□□□ -0.19
CMTM1-215ENST00000531885 PRKAB2O43741 272 aa13.86□□□□□ -0.19
CMTM1-215ENST00000531885 RLBP1P12271 317 aa13.86□□□□□ -0.19
CMTM1-215ENST00000531885 ACLYP53396 1101 aa13.86□□□□□ -0.19
CMTM1-215ENST00000531885 TJAP1Q5JTD0 557 aa13.86□□□□□ -0.19
CMTM1-215ENST00000531885 FAM83BQ5T0W9 1011 aa13.86□□□□□ -0.19
CMTM1-215ENST00000531885 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
CMTM1-215ENST00000531885 PCSK9Q8NBP7 692 aaKnown RBP13.86□□□□□ -0.19
CMTM1-215ENST00000531885 TIFAQ96CG3 184 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms