RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 ARIH1Q9Y4X5 557 aaPredicted RBP9.52□□□□□ -0.89
NXF1-212ENST00000531872 FPGT-TNNI3KV9GXZ4 949 aa9.52□□□□□ -0.89
NXF1-212ENST00000531872 REV3LO60673 3130 aa9.52□□□□□ -0.89
NXF1-212ENST00000531872 ZNFX1Q9P2E3 1918 aaKnown RBP9.52□□□□□ -0.89
NXF1-212ENST00000531872 PLXNA1Q9UIW2 1896 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 MOXD2PA6NHM9 499 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 SLC25A27O95847 323 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 AKR1A1P14550 325 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 TAL1P17542 331 aaPredicted RBP9.51□□□□□ -0.89
NXF1-212ENST00000531872 ACLYP53396 1101 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 PPIGQ13427 754 aaKnown RBP eCLIP9.51□□□□□ -0.897e-10■■■■□ 21.1
NXF1-212ENST00000531872 ZNF792Q3KQV3 632 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 CCSAPQ6IQ19 270 aaPredicted RBP9.51□□□□□ -0.89
NXF1-212ENST00000531872 CCDC174Q6PII3 467 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 KLHDC9Q8NEP7 349 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 NUP133Q8WUM0 1156 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 ARHGAP45Q92619 1136 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 ATG4CQ96DT6 458 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 C1QTNF1Q9BXJ1 281 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 TANGO6Q9C0B7 1094 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 STARD7Q9NQZ5 370 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 SYNGAP1Q96PV0 1343 aa9.51□□□□□ -0.89
NXF1-212ENST00000531872 FLOT1O75955 427 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 GNAI2P04899 355 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 BMP1P13497 986 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 CDK7P50613 346 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 PLS1Q14651 629 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 TMEM132BQ14DG7 1078 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 CCDC85BQ15834 202 aaPredicted RBP9.5□□□□□ -0.89
NXF1-212ENST00000531872 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
NXF1-212ENST00000531872 CCDC129Q6ZRS4 1044 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
NXF1-212ENST00000531872 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
NXF1-212ENST00000531872 ADAMTS5Q9UNA0 930 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 ELP1O95163 1332 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 MROH7Q68CQ1 1323 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 SYNRGQ9UMZ2 1314 aa9.5□□□□□ -0.89
NXF1-212ENST00000531872 PARP14Q460N5 1801 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 IDH1O75874 414 aaKnown RBP9.49□□□□□ -0.89
NXF1-212ENST00000531872 PGK2P07205 417 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 CSF2RAP15509 400 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 IGFBP4P22692 258 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 CST5P28325 142 aaPredicted RBP9.49□□□□□ -0.89
NXF1-212ENST00000531872 RAB30Q15771 203 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 KCNA10Q16322 511 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 PSRC1Q6PGN9 363 aaPredicted RBP9.49□□□□□ -0.89
NXF1-212ENST00000531872 ZNF365Q70YC5 407 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 RIOX2Q8IUF8 465 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 SIAH1Q8IUQ4 282 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 MAGEB6Q8N7X4 407 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 LENG1Q96BZ8 264 aaPredicted RBP9.49□□□□□ -0.89
NXF1-212ENST00000531872 MMP19Q99542 508 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 DBNLQ9UJU6 430 aaKnown RBP9.49□□□□□ -0.89
NXF1-212ENST00000531872 TMX2Q9Y320 296 aa9.49□□□□□ -0.89
NXF1-212ENST00000531872 MPHOSPH10O00566 681 aaKnown RBP9.48□□□□□ -0.89
NXF1-212ENST00000531872 WDR46O15213 610 aaKnown RBP9.48□□□□□ -0.89
NXF1-212ENST00000531872 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
NXF1-212ENST00000531872 ACRP10323 421 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 RARSP54136 660 aaKnown RBP9.48□□□□□ -0.89
NXF1-212ENST00000531872 EVX2Q03828 476 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 POLA2Q14181 598 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 KCTD2Q14681 263 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 TMEM179Q6ZVK1 233 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 TMEM199Q8N511 208 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 MSL3Q8N5Y2 521 aaKnown RBP9.48□□□□□ -0.89
NXF1-212ENST00000531872 SSH3Q8TE77 659 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 HERVK_113Q902F9 699 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 GLT1D1Q96MS3 346 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
NXF1-212ENST00000531872 NKX2-4Q9H2Z4 354 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 VCPKMTQ9H867 229 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 MSRAQ9UJ68 235 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 FAM184BQ9ULE4 1060 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 CNPY2Q9Y2B0 182 aa9.48□□□□□ -0.89
NXF1-212ENST00000531872 COL11A1P12107 1806 aaPredicted RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 TCF20Q9UGU0 1960 aaKnown RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 MYADML2A6NDP7 307 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 ARVCFO00192 962 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 DUSP11O75319 330 aaKnown RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 SNAI1O95863 264 aaPredicted RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 COPB2P35606 906 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 STAT3P40763 770 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 MAMDC4Q6UXC1 1216 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 FAM126BQ8IXS8 530 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 SPICE1Q8N0Z3 855 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 REPS2Q8NFH8 660 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 SH2D4AQ9H788 454 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 SLC28A3Q9HAS3 691 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 ARHGEF10LQ9HCE6 1279 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 IL23AQ9NPF7 189 aa9.47□□□□□ -0.89
NXF1-212ENST00000531872 TLR7Q9NYK1 1049 aaKnown RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 ZNF214Q9UL59 606 aaPredicted RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 YBX2Q9Y2T7 364 aaKnown RBP9.47□□□□□ -0.89
NXF1-212ENST00000531872 TRANK1O15050 2925 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms