RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 VCPKMTQ9H867 229 aa20.91■□□□□ 0.94
PKP3-208ENST00000531857 SLC5A4Q9NY91 659 aa20.91■□□□□ 0.94
PKP3-208ENST00000531857 EYSQ5T1H1 3165 aa20.91■□□□□ 0.94
PKP3-208ENST00000531857 IFIT2P09913 472 aaKnown RBP20.9■□□□□ 0.94
PKP3-208ENST00000531857 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.9■□□□□ 0.942e-8■■■■■ 56.1
PKP3-208ENST00000531857 SIRT2Q8IXJ6 389 aa20.9■□□□□ 0.94
PKP3-208ENST00000531857 GREB1LQ9C091 1923 aaPredicted RBP20.89■□□□□ 0.93
PKP3-208ENST00000531857 TRIM43BA6NCK2 446 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 FCER1AP12319 257 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 ADD2P35612 726 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 CDK8P49336 464 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 ZNF697Q5TEC3 545 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 C12orf60Q5U649 245 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 TRIM43Q96BQ3 446 aaPredicted RBP20.89■□□□□ 0.93
PKP3-208ENST00000531857 BOLA2Q9H3K6 86 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 PDLIM7Q9NR12 457 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 ATP8A2Q9NTI2 1148 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 FBXO28Q9NVF7 368 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 PAG1Q9NWQ8 432 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 ADAMTS5Q9UNA0 930 aa20.89■□□□□ 0.93
PKP3-208ENST00000531857 WDR46O15213 610 aaKnown RBP20.88■□□□□ 0.93
PKP3-208ENST00000531857 PGK2P07205 417 aa20.88■□□□□ 0.93
PKP3-208ENST00000531857 EEF2P13639 858 aaKnown RBP20.88■□□□□ 0.93
PKP3-208ENST00000531857 SH2D4AQ9H788 454 aa20.88■□□□□ 0.93
PKP3-208ENST00000531857 USP17L12C9JPN9 530 aa20.87■□□□□ 0.93
PKP3-208ENST00000531857 USP17L21D6R901 530 aa20.87■□□□□ 0.93
PKP3-208ENST00000531857 CCDC17Q96LX7 622 aa20.87■□□□□ 0.93
PKP3-208ENST00000531857 MMP19Q99542 508 aa20.87■□□□□ 0.93
PKP3-208ENST00000531857 CDX2Q99626 313 aaPredicted RBP20.87■□□□□ 0.93
PKP3-208ENST00000531857 SLC25A27O95847 323 aa20.86■□□□□ 0.93
PKP3-208ENST00000531857 TAL1P17542 331 aaPredicted RBP20.86■□□□□ 0.93
PKP3-208ENST00000531857 TLE2Q04725 743 aa20.86■□□□□ 0.93
PKP3-208ENST00000531857 C1orf53Q5VUE5 145 aa20.86■□□□□ 0.93
PKP3-208ENST00000531857 C16orf86Q6ZW13 317 aa20.86■□□□□ 0.93
PKP3-208ENST00000531857 RPAP2Q8IXW5 612 aaPredicted RBP20.86■□□□□ 0.93
PKP3-208ENST00000531857 XPNPEP3Q9NQH7 507 aa20.86■□□□□ 0.93
PKP3-208ENST00000531857 PHF24Q9UPV7 400 aa20.86■□□□□ 0.93
PKP3-208ENST00000531857 MYH4Q9Y623 1939 aa20.86■□□□□ 0.93
PKP3-208ENST00000531857 MCM3APO60318 1980 aa20.85■□□□□ 0.93
PKP3-208ENST00000531857 PGK1P00558 417 aa20.85■□□□□ 0.93
PKP3-208ENST00000531857 ATP5JP18859 108 aa20.85■□□□□ 0.93
PKP3-208ENST00000531857 ITGB8P26012 769 aa20.85■□□□□ 0.93
PKP3-208ENST00000531857 RIOX2Q8IUF8 465 aa20.85■□□□□ 0.93
PKP3-208ENST00000531857 SEMA6BQ9H3T3 888 aa20.85■□□□□ 0.93
PKP3-208ENST00000531857 VWA5AO00534 786 aa20.84■□□□□ 0.93
PKP3-208ENST00000531857 RARBP10826 455 aa20.84■□□□□ 0.93
PKP3-208ENST00000531857 ZNF792Q3KQV3 632 aa20.84■□□□□ 0.93
PKP3-208ENST00000531857 LENG1Q96BZ8 264 aaPredicted RBP20.84■□□□□ 0.93
PKP3-208ENST00000531857 HAUS7Q99871 368 aa20.84■□□□□ 0.93
PKP3-208ENST00000531857 TINF2Q9BSI4 451 aa20.84■□□□□ 0.93
PKP3-208ENST00000531857 TTYH1Q9H313 450 aaPredicted RBP20.84■□□□□ 0.93
PKP3-208ENST00000531857 KANSL2Q9H9L4 492 aa20.84■□□□□ 0.93
PKP3-208ENST00000531857 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
PKP3-208ENST00000531857 ZNF214Q9UL59 606 aaPredicted RBP20.84■□□□□ 0.93
PKP3-208ENST00000531857 RAD21O60216 631 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 RAB11FIP3O75154 756 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 HMMRO75330 724 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 STAT3P40763 770 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 EPHB4P54760 987 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 KCTD2Q14681 263 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 FAM83BQ5T0W9 1011 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 CTR9Q6PD62 1173 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 REPS2Q8NFH8 660 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.83■□□□□ 0.93
PKP3-208ENST00000531857 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.83■□□□□ 0.93
PKP3-208ENST00000531857 NRBP1Q9UHY1 535 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 PPP1R9AQ9ULJ8 1098 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 COG6Q9Y2V7 657 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 SLC4A4Q9Y6R1 1079 aa20.83■□□□□ 0.93
PKP3-208ENST00000531857 PRUNE2Q8WUY3 3088 aa20.83■□□□□ 0.92
PKP3-208ENST00000531857 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
PKP3-208ENST00000531857 CDH23Q9H251 3354 aa20.82■□□□□ 0.92
PKP3-208ENST00000531857 ZNF865P0CJ78 1059 aaPredicted RBP20.82■□□□□ 0.92
PKP3-208ENST00000531857 UBE3CQ15386 1083 aa20.82■□□□□ 0.92
PKP3-208ENST00000531857 AMOTL1Q8IY63 956 aa20.82■□□□□ 0.92
PKP3-208ENST00000531857 PUS7LQ9H0K6 701 aaKnown RBP20.82■□□□□ 0.92
PKP3-208ENST00000531857 DIS3Q9Y2L1 958 aaKnown RBP20.82■□□□□ 0.92
PKP3-208ENST00000531857 GTF3C3Q9Y5Q9 886 aa20.82■□□□□ 0.92
PKP3-208ENST00000531857 TACC3Q9Y6A5 838 aa20.82■□□□□ 0.92
PKP3-208ENST00000531857 A0A1W2PQ45 241 aaPredicted RBP20.81■□□□□ 0.92
PKP3-208ENST00000531857 A0A1W2PQY0 241 aa20.81■□□□□ 0.92
PKP3-208ENST00000531857 CLTBP09497 229 aa20.81■□□□□ 0.92
PKP3-208ENST00000531857 SMAD3P84022 425 aaKnown RBP20.81■□□□□ 0.92
PKP3-208ENST00000531857 RNF180Q86T96 592 aa20.81■□□□□ 0.92
PKP3-208ENST00000531857 MYLIPQ8WY64 445 aa20.81■□□□□ 0.92
PKP3-208ENST00000531857 NUP88Q99567 741 aaPredicted RBP20.81■□□□□ 0.92
PKP3-208ENST00000531857 GOPCQ9HD26 462 aa20.81■□□□□ 0.92
PKP3-208ENST00000531857 ROBO3Q96MS0 1386 aa20.81■□□□□ 0.92
PKP3-208ENST00000531857 MAFAQ8NHW3 353 aaPredicted RBP20.8■□□□□ 0.92
PKP3-208ENST00000531857 DDRGK1Q96HY6 314 aa20.8■□□□□ 0.92
PKP3-208ENST00000531857 VCANP13611 3396 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 KIAA0355O15063 1070 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 PQBP1O60828 265 aaKnown RBP20.79■□□□□ 0.92
PKP3-208ENST00000531857 ADAMTS4O75173 837 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 MS4A1P11836 297 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 AKR1A1P14550 325 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 STK11IPQ8N1F8 1099 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 DDX19BQ9UMR2 479 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 RIPK3Q9Y572 518 aa20.79■□□□□ 0.92
PKP3-208ENST00000531857 RNPC3Q96LT9 517 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms