RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SHISA4Q96DD7 197 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZNF837Q96EG3 531 aaPredicted RBP8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 MPHOSPH8Q99549 860 aa8.74□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 PLIN1O60240 522 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 F11P03951 625 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 TRIM27P14373 513 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 CTGFP29279 349 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 RBM5P52756 815 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 VGLL4Q14135 290 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 CCDC57Q2TAC2 916 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 RABL6Q3YEC7 729 aaPredicted RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 LDHAL6AQ6ZMR3 332 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 NBPF11Q86T75 865 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 TRIM50Q86XT4 487 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ANKRD13AQ8IZ07 590 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZSCAN1Q8NBB4 408 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 SLC17A8Q8NDX2 589 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ARHGAP45Q92619 1136 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 DPF3Q92784 378 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 CNTNAP3BQ96NU0 1288 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 CNTNAP3Q9BZ76 1288 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 API5Q9BZZ5 524 aaKnown RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 KIAA1024Q9UPX6 916 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 PPP2R3BQ9Y5P8 575 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 PALM3A6NDB9 673 aaPredicted RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 A6NJY4 79 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 SOX1O00570 391 aaPredicted RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 CLDN10P78369 228 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 LRRC24Q50LG9 513 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ATF7IPQ6VMQ6 1270 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 GMCL1Q96IK5 515 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 TEPSINQ96N21 525 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 MEIS3Q99687 375 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 TMEM39BQ9GZU3 492 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ANKRD2Q9GZV1 360 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 TDRD3Q9H7E2 651 aaKnown RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZFYVE28Q9HCC9 887 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZNF358Q9NW07 568 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 ZNF70Q9UC06 446 aaPredicted RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 RIPOR2Q9Y4F9 1068 aa8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 MAFBQ9Y5Q3 323 aaPredicted RBP8.73□□□□□ -1.01
TRIM53CP-201ENST00000531490 A0A1B0GTH6 734 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 TCP10L2B9ZVM9 353 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 IPO8O15397 1037 aaKnown RBP8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 MYO1BO43795 1136 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 RLBP1P12271 317 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 RFX5P48382 616 aaPredicted RBP8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 MMP14P50281 582 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 GRIK5Q16478 980 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 TAF7LQ5H9L4 462 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 PPP1R12CQ9BZL4 782 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 GPAMQ9HCL2 828 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 IQSEC3Q9UPP2 1182 aaPredicted RBP8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 USP3Q9Y6I4 520 aa8.72□□□□□ -1.01
TRIM53CP-201ENST00000531490 COL1A1P02452 1464 aaPredicted RBP8.71□□□□□ -1.01
TRIM53CP-201ENST00000531490 UNCXA6NJT0 531 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 BTBD19C9JJ37 291 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 CDK2AP1O14519 115 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 BACH1O14867 736 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 UBTFL1P0CB47 393 aaPredicted RBP8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 IL1R1P14778 569 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 ATP1A2P50993 1020 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 GTF2A2P52657 109 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 CACNB3P54284 484 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 LACTBP83111 547 aaPredicted RBP8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 TMEM57Q8N5G2 664 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 TPCN2Q8NHX9 752 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 PRO3102Q9H379 93 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 CNNM1Q9NRU3 951 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 STK17AQ9UEE5 414 aa8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 LRRFIP2Q9Y608 721 aaKnown RBP8.71□□□□□ -1.02
TRIM53CP-201ENST00000531490 KIF16BQ96L93 1317 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 A0A1B0GUL6 1792 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 TLR2O60603 784 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 THBS1P07996 1170 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 MSX1P28360 303 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 PLA2G4AP47712 749 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 GAS6Q14393 721 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 CCDC102BQ68D86 513 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 UBE2Q1Q7Z7E8 422 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 ZKSCAN4Q969J2 545 aaPredicted RBP8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 GTPBP3Q969Y2 492 aaKnown RBP8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 DNAAF2Q9NVR5 837 aaKnown RBP8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 CPA4Q9UI42 421 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 TTF2Q9UNY4 1162 aaKnown RBP8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 SNCAIPQ9Y6H5 919 aa8.7□□□□□ -1.02
TRIM53CP-201ENST00000531490 PSME4Q14997 1843 aa8.69□□□□□ -1.02
TRIM53CP-201ENST00000531490 ARHGEF6Q15052 776 aa8.69□□□□□ -1.02
TRIM53CP-201ENST00000531490 MFSD14BQ5SR56 506 aa8.69□□□□□ -1.02
TRIM53CP-201ENST00000531490 ATG9AQ7Z3C6 839 aa8.69□□□□□ -1.02
TRIM53CP-201ENST00000531490 ZNF804AQ7Z570 1209 aa8.69□□□□□ -1.02
TRIM53CP-201ENST00000531490 PANK1Q8TE04 598 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms