RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 KLRC3Q07444 240 aa22.52■■□□□ 1.2
UBXN1-211ENST00000531056 CCAR1Q8IX12 1150 aaKnown RBP22.52■■□□□ 1.2
UBXN1-211ENST00000531056 NUP88Q99567 741 aaPredicted RBP22.52■■□□□ 1.2
UBXN1-211ENST00000531056 IL25Q9H293 177 aa22.52■■□□□ 1.2
UBXN1-211ENST00000531056 BIN2Q9UBW5 565 aaPredicted RBP22.52■■□□□ 1.2
UBXN1-211ENST00000531056 TSPY2A6NKD2 308 aa22.51■■□□□ 1.19
UBXN1-211ENST00000531056 LRRC47Q8N1G4 583 aaKnown RBP22.51■■□□□ 1.19
UBXN1-211ENST00000531056 GMCL1P1Q8NEA9 526 aa22.51■■□□□ 1.19
UBXN1-211ENST00000531056 MOV10L1Q9BXT6 1211 aaKnown RBP22.51■■□□□ 1.19
UBXN1-211ENST00000531056 SPATC1LQ9H0A9 340 aa22.51■■□□□ 1.19
UBXN1-211ENST00000531056 IL17RBQ9NRM6 502 aa22.51■■□□□ 1.19
UBXN1-211ENST00000531056 PPP1R9AQ9ULJ8 1098 aa22.51■■□□□ 1.19
UBXN1-211ENST00000531056 HMGCRP04035 888 aa22.5■■□□□ 1.19
UBXN1-211ENST00000531056 XRCC5P13010 732 aaKnown RBP22.5■■□□□ 1.19
UBXN1-211ENST00000531056 HAND2P61296 217 aa22.5■■□□□ 1.19
UBXN1-211ENST00000531056 TBC1D10CQ8IV04 446 aa22.5■■□□□ 1.19
UBXN1-211ENST00000531056 TRIB2Q92519 343 aa22.5■■□□□ 1.19
UBXN1-211ENST00000531056 DSCC1Q9BVC3 393 aa22.5■■□□□ 1.19
UBXN1-211ENST00000531056 UNC93B1Q9H1C4 597 aa22.5■■□□□ 1.19
UBXN1-211ENST00000531056 RANBP6O60518 1105 aaKnown RBP22.49■■□□□ 1.19
UBXN1-211ENST00000531056 NMT2O60551 498 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 CYP2B6P20813 491 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 PTPREP23469 700 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 RGS2P41220 211 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 NOVP48745 357 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 PPP4R3BQ5MIZ7 849 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 SHCBP1Q8NEM2 672 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 STAG1Q8WVM7 1258 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 SHISA4Q96DD7 197 aa22.49■■□□□ 1.19
UBXN1-211ENST00000531056 CWC22Q9HCG8 908 aaKnown RBP22.49■■□□□ 1.19
UBXN1-211ENST00000531056 SLC15A5A6NIM6 579 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 VWA5AO00534 786 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 MAP2K5Q13163 448 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 GRB14Q14449 540 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 TMEM132BQ14DG7 1078 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 AKNAD1Q5T1N1 836 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 WDR78Q5VTH9 848 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 SAMD1Q6SPF0 538 aaPredicted RBP22.48■■□□□ 1.19
UBXN1-211ENST00000531056 REPS2Q8NFH8 660 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 APBA2Q99767 749 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 SLF1Q9BQI6 1058 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 RNF208Q9H0X6 261 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 RAD50Q92878 1312 aa22.48■■□□□ 1.19
UBXN1-211ENST00000531056 GJB1P08034 283 aa22.47■■□□□ 1.19
UBXN1-211ENST00000531056 PCP11498 1178 aaKnown RBP22.47■■□□□ 1.19
UBXN1-211ENST00000531056 ERCC3P19447 782 aa22.47■■□□□ 1.19
UBXN1-211ENST00000531056 TRIM32Q13049 653 aa22.47■■□□□ 1.19
UBXN1-211ENST00000531056 CENPQQ7L2Z9 268 aaPredicted RBP22.47■■□□□ 1.19
UBXN1-211ENST00000531056 CHMLP26374 656 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 GJA8P48165 433 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 PLS1Q14651 629 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 RRP12Q5JTH9 1297 aaKnown RBP22.46■■□□□ 1.19
UBXN1-211ENST00000531056 SLFN13Q68D06 897 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 TRMT44Q8IYL2 757 aaKnown RBP22.46■■□□□ 1.19
UBXN1-211ENST00000531056 NKX2-3Q8TAU0 364 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 PAK6Q9NQU5 681 aaPredicted RBP22.46■■□□□ 1.19
UBXN1-211ENST00000531056 TOMM22Q9NS69 142 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 TCP11L1Q9NUJ3 509 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 ZNF214Q9UL59 606 aaPredicted RBP22.46■■□□□ 1.19
UBXN1-211ENST00000531056 STX8Q9UNK0 236 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 IVNS1ABPQ9Y6Y0 642 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 NEDD4P46934 1319 aa22.46■■□□□ 1.19
UBXN1-211ENST00000531056 CCL14Q16627 93 aa22.45■■□□□ 1.18
UBXN1-211ENST00000531056 MAP3K21Q5TCX8 1036 aa22.45■■□□□ 1.18
UBXN1-211ENST00000531056 MFSD6Q6ZSS7 791 aa22.45■■□□□ 1.18
UBXN1-211ENST00000531056 MROH8Q9H579 483 aa22.45■■□□□ 1.18
UBXN1-211ENST00000531056 ZNF213O14771 459 aa22.44■■□□□ 1.18
UBXN1-211ENST00000531056 HOXC6P09630 235 aa22.44■■□□□ 1.18
UBXN1-211ENST00000531056 ZKSCAN1P17029 563 aaPredicted RBP22.44■■□□□ 1.18
UBXN1-211ENST00000531056 RIOX2Q8IUF8 465 aa22.44■■□□□ 1.18
UBXN1-211ENST00000531056 PRPF38AQ8NAV1 312 aaKnown RBP22.44■■□□□ 1.18
UBXN1-211ENST00000531056 U2AF1L4Q8WU68 220 aaKnown RBP22.44■■□□□ 1.18
UBXN1-211ENST00000531056 GMCL1Q96IK5 515 aa22.44■■□□□ 1.18
UBXN1-211ENST00000531056 RNF41Q9H4P4 317 aaPredicted RBP22.44■■□□□ 1.18
UBXN1-211ENST00000531056 FEM1BQ9UK73 627 aa22.44■■□□□ 1.18
UBXN1-211ENST00000531056 STRNO43815 780 aa22.43■■□□□ 1.18
UBXN1-211ENST00000531056 SLC25A27O95847 323 aa22.43■■□□□ 1.18
UBXN1-211ENST00000531056 BMP3P12645 472 aa22.43■■□□□ 1.18
UBXN1-211ENST00000531056 NCAPG2Q86XI2 1143 aa22.43■■□□□ 1.18
UBXN1-211ENST00000531056 NPLOC4Q8TAT6 608 aa22.43■■□□□ 1.18
UBXN1-211ENST00000531056 RUFY2Q8WXA3 655 aa22.43■■□□□ 1.18
UBXN1-211ENST00000531056 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.43■■□□□ 1.18
UBXN1-211ENST00000531056 FLRT1Q9NZU1 646 aa22.43■■□□□ 1.18
UBXN1-211ENST00000531056 MKI67P46013 3256 aaKnown RBP22.42■■□□□ 1.18
UBXN1-211ENST00000531056 RPTORQ8N122 1335 aa22.42■■□□□ 1.18
UBXN1-211ENST00000531056 ZNFX1Q9P2E3 1918 aaKnown RBP22.42■■□□□ 1.18
UBXN1-211ENST00000531056 SGPL1O95470 568 aa22.42■■□□□ 1.18
UBXN1-211ENST00000531056 ADORA2AP29274 412 aa22.42■■□□□ 1.18
UBXN1-211ENST00000531056 STAT3P40763 770 aa22.42■■□□□ 1.18
UBXN1-211ENST00000531056 RASGRP2Q7LDG7 609 aa22.42■■□□□ 1.18
UBXN1-211ENST00000531056 ABRAQ8N0Z2 381 aa22.42■■□□□ 1.18
UBXN1-211ENST00000531056 CTNNA3Q9UI47 895 aa22.42■■□□□ 1.18
UBXN1-211ENST00000531056 ATP2A1O14983 1001 aa22.41■■□□□ 1.18
UBXN1-211ENST00000531056 IGHA2P01877 340 aa22.41■■□□□ 1.18
UBXN1-211ENST00000531056 PRKAR2AP13861 404 aaKnown RBP22.41■■□□□ 1.18
UBXN1-211ENST00000531056 SLC1A4P43007 532 aa22.41■■□□□ 1.18
UBXN1-211ENST00000531056 IMMTQ16891 758 aaKnown RBP22.41■■□□□ 1.18
UBXN1-211ENST00000531056 SKAP1Q86WV1 359 aa22.41■■□□□ 1.18
UBXN1-211ENST00000531056 KIFC2Q96AC6 838 aa22.41■■□□□ 1.18
UBXN1-211ENST00000531056 DEFB118Q96PH6 123 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms