RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ABRAQ8N0Z2 381 aa18.98■□□□□ 0.63
CHMP4A-204ENST00000530996 GPATCH3Q96I76 525 aa18.98■□□□□ 0.63
CHMP4A-204ENST00000530996 MMP19Q99542 508 aa18.98■□□□□ 0.63
CHMP4A-204ENST00000530996 KANSL2Q9H9L4 492 aa18.98■□□□□ 0.63
CHMP4A-204ENST00000530996 KCTD2Q14681 263 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 TMEM132BQ14DG7 1078 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 FAM47AQ5JRC9 791 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 PRAMEF19Q5SWL8 479 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 FAM83BQ5T0W9 1011 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 CTR9Q6PD62 1173 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 SIAH1Q8IUQ4 282 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 MAML3Q96JK9 1138 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 PUS7LQ9H0K6 701 aaKnown RBP18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 FBXO28Q9NVF7 368 aa18.97■□□□□ 0.63
CHMP4A-204ENST00000530996 ECHDC1Q9NTX5 307 aa18.96■□□□□ 0.63
CHMP4A-204ENST00000530996 PGK2P07205 417 aa18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 TRIM60Q495X7 471 aa18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 C20orf194Q5TEA3 1177 aa18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 FERMT2Q96AC1 680 aa18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 MKNK2Q9HBH9 465 aa18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 PPP1R9AQ9ULJ8 1098 aa18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 CTDP1Q9Y5B0 961 aaPredicted RBP18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 MYH8P13535 1937 aa18.95■□□□□ 0.62
CHMP4A-204ENST00000530996 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 MINDY4BA8MYZ0 360 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 VWA5AO00534 786 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 RARBP10826 455 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 COPB2P35606 906 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 SLC4A3P48751 1232 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 TDO2P48775 406 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 TSHZ3Q63HK5 1081 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 RIOX2Q8IUF8 465 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 NUP88Q99567 741 aaPredicted RBP18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 XPNPEP3Q9NQH7 507 aa18.94■□□□□ 0.62
CHMP4A-204ENST00000530996 DLL1O00548 723 aa18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 IGHA2P01877 340 aa18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 STAT3P40763 770 aa18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 ADCYAP1R1P41586 468 aa18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 LRRC41Q15345 812 aa18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 SLC39A5Q6ZMH5 540 aa18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 SLF1Q9BQI6 1058 aa18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 ISY1Q9ULR0 285 aaKnown RBP18.93■□□□□ 0.62
CHMP4A-204ENST00000530996 APPP05067 770 aa18.92■□□□□ 0.62
CHMP4A-204ENST00000530996 SNRNP48Q6IEG0 339 aaKnown RBP18.92■□□□□ 0.62
CHMP4A-204ENST00000530996 FAM161BQ96MY7 647 aa18.92■□□□□ 0.62
CHMP4A-204ENST00000530996 MTMR10Q9NXD2 777 aa18.92■□□□□ 0.62
CHMP4A-204ENST00000530996 CNPY2Q9Y2B0 182 aa18.92■□□□□ 0.62
CHMP4A-204ENST00000530996 STXBP5LQ9Y2K9 1186 aa18.92■□□□□ 0.62
CHMP4A-204ENST00000530996 RASA1P20936 1047 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 RNF180Q86T96 592 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 KBTBD3Q8NAB2 608 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 APPBP2Q92624 585 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 STRBPQ96SI9 672 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 TINF2Q9BSI4 451 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 TEX13BQ9BXU2 312 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 NRBP1Q9UHY1 535 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 ZNF214Q9UL59 606 aaPredicted RBP18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 ROBO3Q96MS0 1386 aa18.91■□□□□ 0.62
CHMP4A-204ENST00000530996 RLFQ13129 1914 aa18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 COL6A3P12111 3177 aa18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 PGK1P00558 417 aa18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 ZNF697Q5TEC3 545 aa18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 OSBP2Q969R2 916 aa18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 LENG1Q96BZ8 264 aaPredicted RBP18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 ZNF287Q9HBT7 754 aa18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 PDLIM7Q9NR12 457 aa18.9■□□□□ 0.62
CHMP4A-204ENST00000530996 GSG1L2A8MUP6 293 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 RNF113AO15541 343 aaKnown RBP18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 GPAA1O43292 621 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 PRDM1O75626 825 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 NDUFB10O96000 172 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 AKR1A1P14550 325 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 SBK1Q52WX2 424 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 BADQ92934 168 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 KIFC2Q96AC6 838 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 DDX11Q96FC9 970 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 ZHX1Q9UKY1 873 aaPredicted RBP18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 ADAMTS5Q9UNA0 930 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 MYH7P12883 1935 aa18.89■□□□□ 0.61
CHMP4A-204ENST00000530996 ZFYP08048 801 aaPredicted RBP18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 TAL1P17542 331 aaPredicted RBP18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 GNAT2P19087 354 aa18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 ZNF792Q3KQV3 632 aa18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 GIMAP6Q6P9H5 292 aa18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 CPXCR1Q8N123 301 aa18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 EPB41L4AQ9HCS5 686 aaPredicted RBP18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 NYAP2Q9P242 653 aa18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 CLIP2Q9UDT6 1046 aa18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 DNAH12Q6ZR08 3092 aa18.88■□□□□ 0.61
CHMP4A-204ENST00000530996 F5H6K3 240 aa18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 M0R2C6 588 aa18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 PQBP1O60828 265 aaKnown RBP18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 ZBED4O75132 1171 aa18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 KLRC3Q07444 240 aa18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 SNX17Q15036 470 aa18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 ZNF444Q8N0Y2 327 aaPredicted RBP18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 LRRC47Q8N1G4 583 aaKnown RBP18.87■□□□□ 0.61
CHMP4A-204ENST00000530996 REPS2Q8NFH8 660 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 345.5 ms