RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 TAF1LQ8IZX4 1826 aa6.5□□□□□ -1.37
PCF11-205ENST00000530906 SYCE3A1L190 88 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 PTPDC1A2A3K4 754 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 PATL2C9JE40 543 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 FOXP2O15409 715 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 FIBPO43427 364 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 PRC1O43663 620 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 ADAM23O75077 832 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 IDH1O75874 414 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 HCLS1P14317 486 aaPredicted RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 PDIA3P30101 505 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 LIFRP42702 1097 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 DNM1Q05193 864 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 SCRN1Q12765 414 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 RESTQ13127 1097 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 RASGRF1Q13972 1273 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 LBRQ14739 615 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 SART3Q15020 963 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 CAVIN4Q5BKX8 364 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 CDC37L1Q7L3B6 337 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 SGMS1Q86VZ5 419 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 CERS3Q8IU89 383 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 SYNE4Q8N205 404 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 FOXD4L4Q8WXT5 416 aaPredicted RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 ACSBG1Q96GR2 724 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 SPATA32Q96LK8 384 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 STRBPQ96SI9 672 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 PANK2Q9BZ23 570 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 KRT23Q9C075 422 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 PUS7LQ9H0K6 701 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 RUBCNLQ9H714 662 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 DENND2AQ9ULE3 1009 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 ANGEL1Q9UNK9 670 aaKnown RBP6.49□□□□□ -1.37
PCF11-205ENST00000530906 TAF6LQ9Y6J9 622 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 KIAA1551Q9HCM1 1747 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 MAST2Q6P0Q8 1798 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 CASZ1Q86V15 1759 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 ZNF532Q9HCE3 1301 aa6.49□□□□□ -1.37
PCF11-205ENST00000530906 SBF2Q86WG5 1849 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 CCDC196A0A1B0GTZ2 297 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 CPLX1O14810 134 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 CTAGE5O15320 804 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 STAU1O95793 577 aaKnown RBP6.48□□□□□ -1.37
PCF11-205ENST00000530906 CCDC192P0DO97 292 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 HOXB4P17483 251 aaPredicted RBP6.48□□□□□ -1.37
PCF11-205ENST00000530906 MSX1P28360 303 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 PIP4K2BP78356 416 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 CHRNDQ07001 517 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 GNASQ5JWF2 1037 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 TPTE2Q6XPS3 522 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 LINC00116Q8NCU8 138 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 LEO1Q8WVC0 666 aaPredicted RBP6.48□□□□□ -1.37
PCF11-205ENST00000530906 WASF1Q92558 559 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 TCEANC2Q96MN5 208 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 SETDB2Q96T68 719 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 NAPBQ9H115 298 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 PIH1D3Q9NQM4 214 aaKnown RBP6.48□□□□□ -1.37
PCF11-205ENST00000530906 NDFIP2Q9NV92 336 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 USP21Q9UK80 565 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 PHF24Q9UPV7 400 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 RTCBQ9Y3I0 505 aaKnown RBP6.48□□□□□ -1.37
PCF11-205ENST00000530906 STK36Q9NRP7 1315 aa6.48□□□□□ -1.37
PCF11-205ENST00000530906 C4BP0C0L5 1744 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 MYH13Q9UKX3 1938 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 KRBA1A5PL33 1030 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 GOLGA8BA8MQT2 603 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 SH2B2O14492 632 aaPredicted RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 C2CD2LO14523 706 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 GADD45BO75293 160 aaPredicted RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 YEATS4O95619 227 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 TPM3P06753 285 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 GTF2E1P29083 439 aaPredicted RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 STK3Q13188 491 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 IRF5Q13568 498 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 MAP3K11Q16584 847 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 TMEM214Q6NUQ4 689 aaKnown RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 SYNE3Q6ZMZ3 975 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 RBM43Q6ZSC3 357 aaKnown RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 TTC6Q86TZ1 520 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 ZSCAN30Q86W11 494 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 KCNG4Q8TDN1 519 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 STAG1Q8WVM7 1258 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 BRIP1Q9BX63 1249 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 RBSNQ9H1K0 784 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 NUP62CLQ9H1M0 184 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 ETNK1Q9HBU6 452 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 LRP2BPQ9P2M1 347 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 CCDC39Q9UFE4 941 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 ANAPC4Q9UJX5 808 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 GDF2Q9UK05 429 aaPredicted RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 RCOR1Q9UKL0 485 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 ATXN7L1Q9ULK2 861 aaPredicted RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 C4AP0C0L4 1744 aa6.47□□□□□ -1.37
PCF11-205ENST00000530906 MYO5AQ9Y4I1 1855 aaKnown RBP6.47□□□□□ -1.37
PCF11-205ENST00000530906 KLF18A0A0U1RQI7 1052 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 A0A1W2PQ27 194 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 A0A1W2PQ64 194 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms