RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 NCOA5Q9HCD5 579 aaKnown RBP11.69□□□□□ -0.54
RPUSD4-205ENST00000530903 SH2B1Q9NRF2 756 aaPredicted RBP11.69□□□□□ -0.54
RPUSD4-205ENST00000530903 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
RPUSD4-205ENST00000530903 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
RPUSD4-205ENST00000530903 GOLGA8AA7E2F4 631 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 TRAF5O00463 557 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 ZBTB43O43298 467 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 PFKFB2O60825 505 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 TTLL1O95922 423 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 ICA1Q05084 483 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 FMR1Q06787 632 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 SCRN1Q12765 414 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 CUL4AQ13619 759 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 CATIPQ7Z7H3 387 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 LRRC47Q8N1G4 583 aaKnown RBP11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 PNMA1Q8ND90 353 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 ANKS1AQ92625 1134 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 TMEM47Q9BQJ4 181 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
RPUSD4-205ENST00000530903 PAPPA2Q9BXP8 1791 aa11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 USP2O75604 605 aaPredicted RBP11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 EEF2P13639 858 aaKnown RBP11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 NF2P35240 595 aa11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 NOVP48745 357 aa11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 METAP2P50579 478 aaKnown RBP eCLIP11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 KLRG1Q96E93 195 aa11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
RPUSD4-205ENST00000530903 RAD21O60216 631 aa11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 PPP1R12BO60237 982 aaPredicted RBP11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 DDAH1O94760 285 aa11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 ASNSP08243 561 aa11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 TTLL12Q14166 644 aaPredicted RBP11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 ZNF408Q9H9D4 720 aa11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 NYAP2Q9P242 653 aa11.66□□□□□ -0.54
RPUSD4-205ENST00000530903 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 CDC27P30260 824 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 TROAPQ12815 778 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 DSG2Q14126 1118 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 RTN1Q16799 776 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 MOB2Q70IA6 237 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 SIAH1Q8IUQ4 282 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 FANCBQ8NB91 859 aa11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.65□□□□□ -0.54
RPUSD4-205ENST00000530903 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 RGS20O76081 388 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 CTDNEP1O95476 244 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 CALM1P0DP23 149 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 CALM2P0DP24 149 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 CALM3P0DP25 149 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 ECE1P42892 770 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 IREB2P48200 963 aaKnown RBP11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 RCAN1P53805 252 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 HS6ST3Q8IZP7 471 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 ACER1Q8TDN7 264 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 PICK1Q9NRD5 415 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 FAM217BQ9NTX9 383 aaPredicted RBP11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 NID2Q14112 1375 aa11.64□□□□□ -0.55
RPUSD4-205ENST00000530903 MYH6P13533 1939 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 TRPM7Q96QT4 1865 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 USP17L5A8MUK1 530 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 CPLX1O14810 134 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 JAK2O60674 1132 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 GOLGA8HP0CJ92 632 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 VGLL4Q14135 290 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 GRM4Q14833 912 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 USP17L2Q6R6M4 530 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 CMTR1Q8N1G2 835 aaKnown RBP11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 CTCFLQ8NI51 663 aaPredicted RBP11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 MKL1Q969V6 931 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 INTS4Q96HW7 963 aaKnown RBP11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 SMC3Q9UQE7 1217 aa11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
RPUSD4-205ENST00000530903 FRMPD2Q68DX3 1309 aaPredicted RBP11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 PTPDC1A2A3K4 754 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 DHX16O60231 1041 aaKnown RBP11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 PLEKHA8P1O95397 391 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 PDHBP11177 359 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 PTPRAP18433 802 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 GJB2P29033 226 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
RPUSD4-205ENST00000530903 ARMC9Q7Z3E5 817 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms