RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.536e-6■■□□□ 13.9
CTSB-219ENST00000530640 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
CTSB-219ENST00000530640 SLC44A5Q8NCS7 719 aa18.36■□□□□ 0.53
CTSB-219ENST00000530640 GPRC5AQ8NFJ5 357 aa18.36■□□□□ 0.53
CTSB-219ENST00000530640 NEK1Q96PY6 1258 aa18.36■□□□□ 0.53
CTSB-219ENST00000530640 NUDT12Q9BQG2 462 aa18.36■□□□□ 0.53
CTSB-219ENST00000530640 RNF41Q9H4P4 317 aaPredicted RBP18.36■□□□□ 0.53
CTSB-219ENST00000530640 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
CTSB-219ENST00000530640 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
CTSB-219ENST00000530640 PSMA5P28066 241 aa18.35■□□□□ 0.53
CTSB-219ENST00000530640 MAPK4P31152 587 aa18.35■□□□□ 0.53
CTSB-219ENST00000530640 USP14P54578 494 aa18.35■□□□□ 0.53
CTSB-219ENST00000530640 MB21D2Q8IYB1 491 aaPredicted RBP18.35■□□□□ 0.53
CTSB-219ENST00000530640 IL27Q8NEV9 243 aa18.35■□□□□ 0.53
CTSB-219ENST00000530640 DYNLL2Q96FJ2 89 aa18.35■□□□□ 0.53
CTSB-219ENST00000530640 PAWRQ96IZ0 340 aaKnown RBP18.35■□□□□ 0.53
CTSB-219ENST00000530640 C12orf42Q96LP6 360 aa18.35■□□□□ 0.53
CTSB-219ENST00000530640 UPF3BQ9BZI7 483 aaKnown RBP18.35■□□□□ 0.53
CTSB-219ENST00000530640 KIAA1683Q9H0B3 1180 aa18.35■□□□□ 0.53
CTSB-219ENST00000530640 ORC4O43929 436 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 GUCY1A2P33402 732 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 BMP8BP34820 402 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 HERVK_113P62684 666 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 SEPT2Q15019 361 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 C16orf86Q6ZW13 317 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 ACER1Q8TDN7 264 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 TTC14Q96N46 770 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 CNNM2Q9H8M5 875 aa18.34■□□□□ 0.53
CTSB-219ENST00000530640 GREB1LQ9C091 1923 aaPredicted RBP18.34■□□□□ 0.53
CTSB-219ENST00000530640 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.53
CTSB-219ENST00000530640 HMGB1P09429 215 aaKnown RBP18.33■□□□□ 0.53
CTSB-219ENST00000530640 RPS6KB1P23443 525 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 NT5C2P49902 561 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 GPR153Q6NV75 609 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 RUFY3Q7L099 469 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 NCOA7Q8NI08 942 aa18.33■□□□□ 0.53
CTSB-219ENST00000530640 P2RX7Q99572 595 aaKnown RBP18.33■□□□□ 0.53
CTSB-219ENST00000530640 WDR19Q8NEZ3 1342 aa18.33■□□□□ 0.52
CTSB-219ENST00000530640 CPA1P15085 419 aa18.32■□□□□ 0.52
CTSB-219ENST00000530640 VCAM1P19320 739 aa18.32■□□□□ 0.52
CTSB-219ENST00000530640 MAP3K21Q5TCX8 1036 aa18.32■□□□□ 0.52
CTSB-219ENST00000530640 RALYLQ86SE5 291 aaKnown RBP18.32■□□□□ 0.52
CTSB-219ENST00000530640 CCAR1Q8IX12 1150 aaKnown RBP18.32■□□□□ 0.52
CTSB-219ENST00000530640 INCENPQ9NQS7 918 aa18.32■□□□□ 0.52
CTSB-219ENST00000530640 OGDHLQ9ULD0 1010 aa18.32■□□□□ 0.52
CTSB-219ENST00000530640 CYP46A1Q9Y6A2 500 aa18.32■□□□□ 0.52
CTSB-219ENST00000530640 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 AKR1B1P15121 316 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 CDK8P49336 464 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 ANTXR2P58335 489 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 EXOSC10Q01780 885 aaKnown RBP18.31■□□□□ 0.52
CTSB-219ENST00000530640 PDE4BQ07343 736 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 TRDNQ13061 729 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 KRT23Q9C075 422 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 PLIN4Q96Q06 1357 aa18.31■□□□□ 0.52
CTSB-219ENST00000530640 B4E1Z4 1266 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 CD2BP2O95400 341 aaKnown RBP18.3■□□□□ 0.52
CTSB-219ENST00000530640 RGS2P41220 211 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 NEK4P51957 841 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 CCNA1P78396 465 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 ICA1Q05084 483 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 DHX32Q7L7V1 743 aaKnown RBP18.3■□□□□ 0.52
CTSB-219ENST00000530640 FBXL16Q8N461 479 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 CCDC17Q96LX7 622 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 MCM5P33992 734 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 ANP32AP39687 249 aaKnown RBP18.3■□□□□ 0.52
CTSB-219ENST00000530640 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 ERVK-24P63145 666 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 CYB5R4Q7L1T6 521 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 TRIB2Q92519 343 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 ESR2Q92731 530 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 SNX21Q969T3 373 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 AGXT2Q9BYV1 514 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
CTSB-219ENST00000530640 C11orf49Q9H6J7 331 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
CTSB-219ENST00000530640 SH2D4AQ9H788 454 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 ARHGEF10LQ9HCE6 1279 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
CTSB-219ENST00000530640 A0A1W2PRG0 241 aa18.29■□□□□ 0.52
CTSB-219ENST00000530640 ST18O60284 1047 aa18.29■□□□□ 0.52
CTSB-219ENST00000530640 PEX10O60683 326 aa18.29■□□□□ 0.52
CTSB-219ENST00000530640 KDM4AO75164 1064 aa18.29■□□□□ 0.52
CTSB-219ENST00000530640 PRDM1O75626 825 aa18.29■□□□□ 0.52
CTSB-219ENST00000530640 CYP2B6P20813 491 aa18.29■□□□□ 0.52
CTSB-219ENST00000530640 RASA1P20936 1047 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms