RNA–Protein interactions for RNA: ENST00000530413.1

CFL1-209, Transcript of cofilin 1, humanhuman

TSL 1 (best)

Gene CFL1, Length 647 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-209ENST00000530413 HAUS7Q99871 368 aa18.28■□□□□ 0.52
CFL1-209ENST00000530413 PRDM5Q9NQX1 630 aaPredicted RBP18.28■□□□□ 0.52
CFL1-209ENST00000530413 FBXO28Q9NVF7 368 aa18.28■□□□□ 0.52
CFL1-209ENST00000530413 DDX19BQ9UMR2 479 aa18.28■□□□□ 0.52
CFL1-209ENST00000530413 ADAMTS5Q9UNA0 930 aa18.28■□□□□ 0.52
CFL1-209ENST00000530413 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
CFL1-209ENST00000530413 PGK2P07205 417 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 UBE3CQ15386 1083 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 RIOX2Q8IUF8 465 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 BADQ92934 168 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 SLC4A4Q9Y6R1 1079 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 ZNF236Q9UL36 1845 aa18.27■□□□□ 0.52
CFL1-209ENST00000530413 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 C9orf50Q5SZB4 431 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 CTR9Q6PD62 1173 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 MMP19Q99542 508 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 XPNPEP3Q9NQH7 507 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 PDLIM7Q9NR12 457 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 NRBP1Q9UHY1 535 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 NAV1Q8NEY1 1877 aa18.26■□□□□ 0.51
CFL1-209ENST00000530413 TRIM43BA6NCK2 446 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 VWA5AO00534 786 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 RAD21O60216 631 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 STAT3P40763 770 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 TLE2Q04725 743 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 KCTD2Q14681 263 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 ZNF792Q3KQV3 632 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 ZNF697Q5TEC3 545 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 C1orf53Q5VUE5 145 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 SH3RF1Q7Z6J0 888 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 TRIM43Q96BQ3 446 aaPredicted RBP18.25■□□□□ 0.51
CFL1-209ENST00000530413 TINF2Q9BSI4 451 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 GOPCQ9HD26 462 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 PHF24Q9UPV7 400 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 A0A0G2JMZ2 1700 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 A0A0C4DFX4 3053 aa18.25■□□□□ 0.51
CFL1-209ENST00000530413 RARBP10826 455 aa18.24■□□□□ 0.51
CFL1-209ENST00000530413 TAL1P17542 331 aaPredicted RBP18.24■□□□□ 0.51
CFL1-209ENST00000530413 FAM83BQ5T0W9 1011 aa18.24■□□□□ 0.51
CFL1-209ENST00000530413 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
CFL1-209ENST00000530413 PUS7LQ9H0K6 701 aaKnown RBP18.24■□□□□ 0.51
CFL1-209ENST00000530413 ZNF214Q9UL59 606 aaPredicted RBP18.24■□□□□ 0.51
CFL1-209ENST00000530413 PPP1R9AQ9ULJ8 1098 aa18.24■□□□□ 0.51
CFL1-209ENST00000530413 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
CFL1-209ENST00000530413 PGK1P00558 417 aa18.23■□□□□ 0.51
CFL1-209ENST00000530413 ZSCAN25Q6NSZ9 544 aa18.23■□□□□ 0.51
CFL1-209ENST00000530413 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.23■□□□□ 0.51
CFL1-209ENST00000530413 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
CFL1-209ENST00000530413 FRMPD3Q5JV73 1810 aa18.23■□□□□ 0.51
CFL1-209ENST00000530413 ZNF865P0CJ78 1059 aaPredicted RBP18.22■□□□□ 0.51
CFL1-209ENST00000530413 RNF180Q86T96 592 aa18.22■□□□□ 0.51
CFL1-209ENST00000530413 TACC3Q9Y6A5 838 aa18.22■□□□□ 0.51
CFL1-209ENST00000530413 DNAH12Q6ZR08 3092 aa18.21■□□□□ 0.51
CFL1-209ENST00000530413 RLFQ13129 1914 aa18.21■□□□□ 0.51
CFL1-209ENST00000530413 ITGB8P26012 769 aa18.21■□□□□ 0.51
CFL1-209ENST00000530413 COPB2P35606 906 aa18.21■□□□□ 0.51
CFL1-209ENST00000530413 NUP88Q99567 741 aaPredicted RBP18.21■□□□□ 0.51
CFL1-209ENST00000530413 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
CFL1-209ENST00000530413 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
CFL1-209ENST00000530413 LRRCC1Q9C099 1032 aa18.21■□□□□ 0.51
CFL1-209ENST00000530413 SEMA6BQ9H3T3 888 aa18.21■□□□□ 0.51
CFL1-209ENST00000530413 CHMP4BQ9H444 224 aaKnown RBP18.21■□□□□ 0.51
CFL1-209ENST00000530413 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.51
CFL1-209ENST00000530413 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
CFL1-209ENST00000530413 AKR1A1P14550 325 aa18.2■□□□□ 0.5
CFL1-209ENST00000530413 RASA1P20936 1047 aa18.2■□□□□ 0.5
CFL1-209ENST00000530413 SMAD3P84022 425 aaKnown RBP18.2■□□□□ 0.5
CFL1-209ENST00000530413 STK11IPQ8N1F8 1099 aa18.2■□□□□ 0.5
CFL1-209ENST00000530413 LENG1Q96BZ8 264 aaPredicted RBP18.2■□□□□ 0.5
CFL1-209ENST00000530413 STRBPQ96SI9 672 aaKnown RBP18.2■□□□□ 0.5
CFL1-209ENST00000530413 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
CFL1-209ENST00000530413 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
CFL1-209ENST00000530413 A0A1W2PQ45 241 aaPredicted RBP18.19■□□□□ 0.5
CFL1-209ENST00000530413 A0A1W2PQY0 241 aa18.19■□□□□ 0.5
CFL1-209ENST00000530413 CLTBP09497 229 aa18.19■□□□□ 0.5
CFL1-209ENST00000530413 EPHB4P54760 987 aa18.19■□□□□ 0.5
CFL1-209ENST00000530413 SBK1Q52WX2 424 aa18.19■□□□□ 0.5
CFL1-209ENST00000530413 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
CFL1-209ENST00000530413 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
CFL1-209ENST00000530413 NYAP2Q9P242 653 aa18.19■□□□□ 0.5
CFL1-209ENST00000530413 ROBO3Q96MS0 1386 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 GSG1L2A8MUP6 293 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 F5H6K3 240 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 KIAA0355O15063 1070 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 PQBP1O60828 265 aaKnown RBP18.18■□□□□ 0.5
CFL1-209ENST00000530413 ADAMTS4O75173 837 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 KLRC3Q07444 240 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 SNRNP48Q6IEG0 339 aaKnown RBP18.18■□□□□ 0.5
CFL1-209ENST00000530413 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 TTYH1Q9H313 450 aaPredicted RBP18.18■□□□□ 0.5
CFL1-209ENST00000530413 RIPK3Q9Y572 518 aa18.18■□□□□ 0.5
CFL1-209ENST00000530413 MINDY4BA8MYZ0 360 aa18.17■□□□□ 0.5
CFL1-209ENST00000530413 SNAI1O95863 264 aaPredicted RBP18.17■□□□□ 0.5
CFL1-209ENST00000530413 NDUFB10O96000 172 aa18.17■□□□□ 0.5
CFL1-209ENST00000530413 RAG1P15918 1043 aa18.17■□□□□ 0.5
CFL1-209ENST00000530413 ACLYP53396 1101 aa18.17■□□□□ 0.5
CFL1-209ENST00000530413 GIMAP6Q6P9H5 292 aa18.17■□□□□ 0.5
CFL1-209ENST00000530413 MSL3Q8N5Y2 521 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms